| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2794 |
|---|
| Symbol | ccoP |
|---|
| ID | 5151119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 2889349 |
|---|
| End bp | 2890221 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640557679 |
|---|
| Product | cytochrome-c oxidase fixP chain |
|---|
| Protein accession | YP_001238833 |
|---|
| Protein GI | 148254248 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
|---|
| TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.40028 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.764362 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACC ATACCGAAGT CGACAGCGTC TCCGGCACCG CCACGACGGG CCACGCCTGG
GACGGCATCA AGGAGCTCAA CACCCCGCTG CCGCGGTGGT GGGTGATCAC CTTCTACATC
ACCATCATCT GGGCGATCGG CTACTGGATC GTGTATCCGG CCTGGCCGAC CATCTCCAGC
AACACCAAGG GCCTGTTCGG CTACTCGTCC CGCGCGGACG TGGCGGTCGA GCTCGCCAAT
CTCGAGAAGA TCCGCGGCGC CAAGATGGCG GCGCTGGCCA CTGCCTCGCT CGCCGACATC
GAGAAGGACC CGCAGATGCT CGCCCTGGCG CGCGCCAAGG GCAAGACCGT GTTCGGCGAC
AATTGCGCCG CCTGCCACGG CACGGGTGCG GCCGGCGCCA AGGGCTTCCC GAACCTGAAC
GACGACGACT GGCTGTGGGG CGGCTCGCTG GAGCAGATCC AGCAGACCCT GCTGTACGGC
GTGCGCTCGG GCCATCCGAA GACCCGTGAA GGCCAGATGC TCGCTTTCGG CAAGGACGGT
GTCCTGAAGC CGGCGGAGAT CGTCACGGTC GCCAACTATG TCCGCGAGCT AGCGGGCCTG
CCGACCCGGC AGGGCTACGA CGCCAAGGCG GGCGCCAAGA TCTTCGCCGA GAACTGCGTC
GCCTGCCATG GCGACAATGC CAAGGGCAAT CCGGAGGTCG GCGCGCCGAA CCTCACGGAC
AAGATCTGGC TCTATGGCTC GGACGAGGCG ACCCTGATCG AGACCATCAC CAATGGTCGC
GCCGGCGTCA TGCCGGCCTG GGAAGGCCGG CTCGACCCGA CCACGATCAA GGCGATGGCG
GTCTATGTCC ACTCGCTGGG TGGAGGAAAG TAA
|
|---|
| Protein sequence | MADHTEVDSV SGTATTGHAW DGIKELNTPL PRWWVITFYI TIIWAIGYWI VYPAWPTISS
NTKGLFGYSS RADVAVELAN LEKIRGAKMA ALATASLADI EKDPQMLALA RAKGKTVFGD
NCAACHGTGA AGAKGFPNLN DDDWLWGGSL EQIQQTLLYG VRSGHPKTRE GQMLAFGKDG
VLKPAEIVTV ANYVRELAGL PTRQGYDAKA GAKIFAENCV ACHGDNAKGN PEVGAPNLTD
KIWLYGSDEA TLIETITNGR AGVMPAWEGR LDPTTIKAMA VYVHSLGGGK
|
|---|
| |