| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2737 |
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| Symbol | |
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| ID | 5152382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 2829956 |
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| End bp | 2833036 |
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| Gene Length | 3081 bp |
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| Protein Length | 1026 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640557627 |
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| Product | AcrB/AcrD/AcrF family mulitdrug efflux protein |
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| Protein accession | YP_001238781 |
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| Protein GI | 148254196 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.917561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTCA CAGACATCTT CATCCGCCGG CCGGTACTGG CGCTCGTGGT CAGCGCCCTG
ATCCTCGTCC TCGGCCTGCG CTCGATGACG ACGCTCTCGA TCCTGCAATA TCCGCGCACC
CAGAACGCGA TCGTCACGGT GAGCACCGCC TATGCCGGCG CCGATTCCGA CATCATCGCG
GGCTTCATCA CGACGCCGCT CGAGAATGCG ATCGCCCAGG CCAACGGCAT CGACTACATG
ACCTCGACCA GCGTCACCGG CAGCAGCACC ATCACGGTCA ACCTGCGGCT CAATTACGAT
TCCGGCAAGG CGATGACCGA GATCAACGCC AAGGTGAACT CGGTGTTGAA TCAGCTGCCG
ACCGGCACGC AACAGCCGAC CTTGACCCTC AAGGTGGGCC AGACCATCGA TGCGATGTAT
ATCGGCTTCG CCAGCGACGT GCTCGCGCCC AACCAGATCA CGGACTATCT GACCCGCGTG
GTGCAGCCGA AGCTCCAGGC GGTCTCGGGG GTGCAGACCG CCGAGCTGAT CGGCGCCAAG
AAGTTCGCGC TCCGCGCCTG GCTCGATCCC GACAAGCTCG CCGCCTACGG CCTGACCGCG
ACGGACGTGT CGACCGCCTT GTCCGGCAAT GACTACATTT CCGGTCTCGG CACGACCAAG
GGCCGGCTGG TGCAGGTCGA CCTCGCCGCG GCGACCAACC TGCATTCGCT GGAGCAATAC
CGCAACCTGG TCGTGAAGCA GGTGAACGGC GCCATCATCC GCCTGCGTGA CGTCGCCAGC
GTCACCCTCG GCAATGACGA CTATGACACG GCGACACGCT TCAACGGCAA GACCGCGGTC
TATATCGGCA TTCAGGTGGC GCCGACGGCC AATCTGCTCG ACGTGATCAA TGGCGTGAAG
GCCGTCTTCC CGGATCTGCA GCAGCAGTTG CCCAACGGCA TCCGCAGCGA GATCATCTAC
GATTCTACCG ACTTCGTGAA CTCCTCGATC GACGAGGTCG AGCACACCCT GGTGGAGGCG
ATCGGCATCG TCATCGTGGT CGTGTTCATG TTCCTGGGCT CGTGGCGCTC GGTCCTGATC
CCGGTCATCG CCATTCCCCT GTCGCTGATC GGCACCTTCG GCCTGATGCT CCTGATGGGC
TTCTCCATCA ACCTGCTCAC CTTGCTGGCC CTGGTGCTCG CCATCGGCCT CGTCGTCGAC
GATGCCATCA TCGTCGTCGA GGCCGTGCAT CGCCTGATCG ACGAGGGCGT GTCGCCGGTC
GAGGCGGCGA TCCAGTCGGC GCGGGCCCTG GCGAGCCCGA TCATCGCGAT GACCGTGGTA
CTGATCGCGG TCTATGTGCC CGTCGGCTTC CAGGGCGGCC TCACCGGCGC GCTGTTCACC
GAGTTCGCCT TTACGCTGGC CGGCGCCGTC ACCGTCTCGG CGGTGATCGC GCTGACCTTG
TCGCCGATGA ACTGCGCCTG GCTGCTGCGG CGGACCGAGC GCGGTTCGAC CACGCTGGAG
GCGCGGCTCG TGCGCGCGAT CGACCACGTG CTCGAGCGGC TCGCGCATGC CTATCGCCGC
TGCCTTGAAA GCGTGTTCTC GACCAAGCCT GTCGTCGTGG TGTTCGCGTT TCTGCTGCTC
GCGATGATCC CCTGGCTCTA TGTCAGCTCC ACCAGCGAGC TCGCACCGGA CGAGGACCAG
GGCGTGGTGC TGACGCTGAC CAACTCGGCG CCTTCGGCCA CGCTGGAGCA GCGCCAGTTC
TATGCGCAGC AATTGCATGA CCTGATCGCG GATCGGCCGG AGACACGCAC GGTGTTCCAG
ATCGACGCCT CCACGCAGGT GATCGGCGGC TGGGTGCTCA AGCCCTGGGA TCAGCGCAAG
GCAACGACGA AGACCTTGCA GCCTGAATTC CAGCAGATGC TGAATGGCAT CGCCGGCGCG
CGCTCGGTCG CCTTCCAGCC GTCGCCGCTG CCGGGCAGCA ACGGCCTGCC GATCCAGTTC
GTGATCGGCA GCACCGGCAC CTTCAACCAG CTCAATGATG TGTCGCGCGA CCTCATGAAC
AAGGCGCTCG CCAGTGGCAA GTTCATCTTC CTCGACAGCG ACCTCAAGAT CGACAAGCCG
CAGACCACCG TCGTGTTCGA CCGCGACAAG GCCGCCGATC TCGGCCTCAA GATGAGCGAT
CTCGGCGGCG CGCTCGCCAC CATGCTGGGC GGCAATTATC TCGATTATTT CAGCCTCGAG
GGCCGCTCCT ACAAGGTGAT CCCCCAGGTG CGGCAGAACG ACCGCCTGAC CGACGCGCAA
CTCCTGGATT ATTCGATCCG CGCCGGCAGC AGCACCATGG TGCCGCTTGC GACGGTCGCC
CATCTCGAGC ACAAGACAAT CCCGGAGTCG CTTAACCACT TCCAGCAGAT CAACGCCGCG
ACCATCTCCG GCGTCGCGAT GCCGGGTGTC TCGATGGGAG ACGCGCTGGC GACGCTGAAG
GAGCTCGGGA AGTCCCTGCC ATCGGGCTAT TCGATCGATT ATGGCGGCGC CTCGCGGCAG
CTCGAACAGG AATCCGGCGG CTTCGTCACC ACCTTCGTCT TCGCGCTGAT CATCATCTTC
CTGGCGCTCG CCGCCCTCTT CAACAGCTTC GTCGATCCCA TCATCATCCT GGTCTCGGTG
CCGATGTCGC TGGCCGGCGC GCTGATCTTC ATCAGCCTCG GCATCGGCGG CGCCAGCATC
AACATCTACA CCCAGGTCGG CCTCGTCACC CTGATGGGCC TGGTCAGCAA GCACGGCATC
CTGATGGTGG AGGTCGCCAA TGAGCTGCGT GAACAGGGCA AGGACCGCAC CGAGGCGATC
ATCGAAGCCG CGACGATCCG GCTGCGGCCG ATCCTGATGA CGACCGCGGC GATGGTGCTC
GGCGTGATCC CGCTGATCAC CGCGAGCGGC GCCGGCGCGG TGTCGCGCTT CAACATGGGC
CTGGTCATCG CCACCGGCCT CTCGATCGGC ACCCTGTTCA CGCTGTTCGT GGTCCCCGTC
GCCTATGCGC TGATTGCCCA TCGCGGCACA ACGGTCGAGG CGACAGCGCA CAGCAAGGAG
GCGCCCGCCG CCGTCTCGTG A
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| Protein sequence | MRFTDIFIRR PVLALVVSAL ILVLGLRSMT TLSILQYPRT QNAIVTVSTA YAGADSDIIA
GFITTPLENA IAQANGIDYM TSTSVTGSST ITVNLRLNYD SGKAMTEINA KVNSVLNQLP
TGTQQPTLTL KVGQTIDAMY IGFASDVLAP NQITDYLTRV VQPKLQAVSG VQTAELIGAK
KFALRAWLDP DKLAAYGLTA TDVSTALSGN DYISGLGTTK GRLVQVDLAA ATNLHSLEQY
RNLVVKQVNG AIIRLRDVAS VTLGNDDYDT ATRFNGKTAV YIGIQVAPTA NLLDVINGVK
AVFPDLQQQL PNGIRSEIIY DSTDFVNSSI DEVEHTLVEA IGIVIVVVFM FLGSWRSVLI
PVIAIPLSLI GTFGLMLLMG FSINLLTLLA LVLAIGLVVD DAIIVVEAVH RLIDEGVSPV
EAAIQSARAL ASPIIAMTVV LIAVYVPVGF QGGLTGALFT EFAFTLAGAV TVSAVIALTL
SPMNCAWLLR RTERGSTTLE ARLVRAIDHV LERLAHAYRR CLESVFSTKP VVVVFAFLLL
AMIPWLYVSS TSELAPDEDQ GVVLTLTNSA PSATLEQRQF YAQQLHDLIA DRPETRTVFQ
IDASTQVIGG WVLKPWDQRK ATTKTLQPEF QQMLNGIAGA RSVAFQPSPL PGSNGLPIQF
VIGSTGTFNQ LNDVSRDLMN KALASGKFIF LDSDLKIDKP QTTVVFDRDK AADLGLKMSD
LGGALATMLG GNYLDYFSLE GRSYKVIPQV RQNDRLTDAQ LLDYSIRAGS STMVPLATVA
HLEHKTIPES LNHFQQINAA TISGVAMPGV SMGDALATLK ELGKSLPSGY SIDYGGASRQ
LEQESGGFVT TFVFALIIIF LALAALFNSF VDPIIILVSV PMSLAGALIF ISLGIGGASI
NIYTQVGLVT LMGLVSKHGI LMVEVANELR EQGKDRTEAI IEAATIRLRP ILMTTAAMVL
GVIPLITASG AGAVSRFNMG LVIATGLSIG TLFTLFVVPV AYALIAHRGT TVEATAHSKE
APAAVS
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