Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_2717 |
Symbol | |
ID | 5153437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 2811959 |
End bp | 2812894 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640557609 |
Product | putative sugar (D-ribose) ABC transporter (periplasmic binding protein) |
Protein accession | YP_001238763 |
Protein GI | 148254178 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.903227 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGT TGCTGTATGC GGTCGCGTCG CTCGCGATCA TGCTGGCCCC GGCGCAGGCC GAGACCAAGT ATCGTTTCGC CGTCGTGCCG AAGGCGATGA ACAATCCGTT CTTCGACGTC GCGCGCGACG GTTGCCTGAA GCGCGCCAAG GAGCTCGGCA ATGTCGAGTG CATCTACAAG GGGCCGATCG AGCACGAGCC GGCCACGCAG GCGCAGATCA TCCAGGACTT CATCACCCAG AAGGTCGACG GCCTCGCGAT CTCGGTCGCC GATGTCGCGG CGATGTCCAA GTCGATCGAC GCGGCGACCG CGGCGGGCAT TCCCGTCATC ACGTTCGACG CGGATGCACC CGGCTCGAAG CGCCTCGCTT ATATCGGCAC CAACAACAAG GATTTCGGCC TCGCCCTCGG CAAGCAGCTG CTGCAGCTCA AGCCTGAAGG CGGCAAATAC GCCGTCGTCT CGGGCGGCCC GGGCGCCAAG AATCTTGCCG AGCGCGTCGA CGGCGTGCGT GAGGCGCTGA AGGGCTCGAA GTGGACGGAA GTGGCGGGCT CGCCGACCTT CTGCAACGAC GATCCAGCGC TCGCCGTGCA GCAGATGGCC GATCTGCGCA CCGCGACGCC CGACCTCGCC GCGATCGTGC CGGTCGGTGG CTGGCCGATG TTCGCGCCCG AGGGCTACAA GGCGTTCGTC AACAAGAACC GCAAGGACAT CGACGCCGGC AAGCTGACGC TGGTCGTCGC TGATACGCTC AAGATGCAGC TCGAACTGCT GCGCGACGGT TATTCCAACG CACTCACCGG CCAGCGCCCG TTCGAGATGG GCGAGAAGGC GATGGATACG CTGCTGGCGA TCAAGAAGGG CGAGAAGGTG CCGGAGGTGA TCTATACCGG CCTCGACCTC GTCACCAAGG ACAACGTCGC CAAGCTTCTG AACTAA
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Protein sequence | MKKLLYAVAS LAIMLAPAQA ETKYRFAVVP KAMNNPFFDV ARDGCLKRAK ELGNVECIYK GPIEHEPATQ AQIIQDFITQ KVDGLAISVA DVAAMSKSID AATAAGIPVI TFDADAPGSK RLAYIGTNNK DFGLALGKQL LQLKPEGGKY AVVSGGPGAK NLAERVDGVR EALKGSKWTE VAGSPTFCND DPALAVQQMA DLRTATPDLA AIVPVGGWPM FAPEGYKAFV NKNRKDIDAG KLTLVVADTL KMQLELLRDG YSNALTGQRP FEMGEKAMDT LLAIKKGEKV PEVIYTGLDL VTKDNVAKLL N
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