| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2716 |
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| Symbol | rbsC |
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| ID | 5153436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 2810774 |
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| End bp | 2811871 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640557608 |
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| Product | high-affinity D-ribose ABC transporter membrane protein |
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| Protein accession | YP_001238762 |
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| Protein GI | 148254177 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.139094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGTCC CGTCGGAGAC GCCCGTGGCG AGCAGCGAGG TCACTTTCAC CAATGTCGGC
GCTATCAGAT GGTGGCATCG CGGCCTGTTC GCGTCGCAGA CAGCCTATGT GACCCTGGCG
CTGATCGCGC TCATCATCCT GATGAGCTTC GCGAGTCCCT ATTTCCTGAC CGAGGGGAAT
CTGCAGAACG TCGCCAAGAA CTTTTCCTTC ATCGCCATCG CCACGCTCGG CATCACCTTC
GTGATCATCA CCGGCGGCAT CGACCTGTCC GTCGGCTCAC TGATGTGCTT CGCGGCGATG
ATCACCTCGA TGGTGATGAC GACGCTGTCG ACCCCCGGCG CGCCGCTGTC GTCGCTGTTC
GTGCATCTGG CCGCCGACGG CAAGACCGTG GTCGCCAATG TACCCGGCCT GATCCTGGTC
GTGTCGGTGC TCGCGGGCCT CGTAGTGTCG GTGCTCGTCG GCCTCGTCAA CGGCATGTGC
ATCGCCATCC TCGGCCTGTC GCCATTCGTG ACCACACTCG GCATGCTGTC GATCGTGCGC
GGCCTCTGCT ACGTGATCTC CAACGGCAGG GGCAGCTTTC CCGGCGGTCC GGACGCCGAG
TATTTCTACG CGCTCACCCA AGGCGACTTG TGGGGCCTGC CGGCGCCGTT CATCTATCTG
GTCATGCTCG CGCTGGTGAT GGCCGTGGTG CTGCATCACA GCGCGTTCGG CCGCCACGTG
TTCGCGATCG GCGGCAACGA GAAGGCCGCG GAGCTCACCG GCATCTCGGT GACGCGGGTC
AAGATTGAGG TCTATGTGAT CGGCGCGCTC GCCGCCGGGC TGCAGGGCAT CATCATCTCC
GGCTGGCTCG GCTCGGCGCC GGCCAACATG GCGACATCCT ACGAGCTCAA CGTGATCGCG
GCCGCGGTGA TCGGCGGCGC CAATCTGGCC GGCGGCATCG GTGGTCCGCT CGGTGCGATC
GTCGGCTGCG TGCTGCTCGA AGTGATCCGC AACGGGCTGG TGCTGGCGCA GGTCAACTCC
TATTGGCAGC AGACGCTGGT CGGCGTGATC ATCATCGCCG CGGTGCTGGT CGACCGCATT
CGCGCGCGGC TGATGTGA
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| Protein sequence | MSVPSETPVA SSEVTFTNVG AIRWWHRGLF ASQTAYVTLA LIALIILMSF ASPYFLTEGN
LQNVAKNFSF IAIATLGITF VIITGGIDLS VGSLMCFAAM ITSMVMTTLS TPGAPLSSLF
VHLAADGKTV VANVPGLILV VSVLAGLVVS VLVGLVNGMC IAILGLSPFV TTLGMLSIVR
GLCYVISNGR GSFPGGPDAE YFYALTQGDL WGLPAPFIYL VMLALVMAVV LHHSAFGRHV
FAIGGNEKAA ELTGISVTRV KIEVYVIGAL AAGLQGIIIS GWLGSAPANM ATSYELNVIA
AAVIGGANLA GGIGGPLGAI VGCVLLEVIR NGLVLAQVNS YWQQTLVGVI IIAAVLVDRI
RARLM
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