| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2703 |
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| Symbol | ligC |
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| ID | 5156291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 2794711 |
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| End bp | 2795670 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640557595 |
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| Product | 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase |
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| Protein accession | YP_001238749 |
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| Protein GI | 148254164 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.840642 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGA CCATCAAGGT CGCGCTTGCC GGCGCCGGCG CCTTCGGCAT CAAGCATCTC
GACGGCATCA AGAACATCGA TGGCGTCGAG GTGGTGTCGC TGGTGGGGCG CCGCTTCGAC
CAGACCAAGG AAGTCGCCGA CAAATACGGC ATCAAGCACG TCTCGACCGA ACTCGCCGAC
AGCCTGAAGC TGCCGGAGGT CGACGCCGTG ATCCTCTGCA CGCCGACGCA GATGCATGCG
GCGCAGGCAA TCGACTGCCT CAAGGCCGGC AAGCACGTCC AGGTCGAGAT TCCGCTCGCG
GATTCGCTGA AGGACGCGCA GCAGGTCGTC GAGCTGCAGA AGGAGACCAA GCTGGTCGCG
ATGTGCGGCC ACACAAGGCG CTTCAACCCC AGCCATCAGT TCGTGCACAA GAAGATCAAG
GCCGGCGAGT TCCACATCCA GCAGATGGAC GTGCAGACCT ACTTCTTCCG CCGCACCAAC
ATGAATGCGC TGGGCCAGCC GCGCAGCTGG ACCGATCATC TGCTGTGGCA CCACGCCGCC
CATACCGTCG ACCTGTTCGC CTATCAGGCG GGCTCGCCGA TTGTGAAGGC CAACGCGATC
CAGGGACCGA TCCACCCGAC GCTGGGCATC GCCATGGACA TGTCGATCCA GCTCAAGGCC
GCCAACGGCG CGATCTGCAC CCTGTCGCTG TCGTTCAACA ATGACGGCCC GCTCGGCACC
TTCTTCCGCT ACATCGGCGA CACCGGCACC TACATCGCCC GCTACGACGA TCTGGTGAAC
GGCAAGGAGG AGAAGATCGA CGTCTCCAAG GTCGACGTCT CCATGAACGG CATCGAGCTG
CAGGACCGCG AGTTCTTCGC CGCGATCAAG GAGGGCCGCG AGCCCAACGC TTCGGTCGCC
CAGGTGCTGC CCTGCTACCA GGTGCTGCAC GATCTCGACG TGCAGCTCGC CAAGGGCTGA
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| Protein sequence | MSKTIKVALA GAGAFGIKHL DGIKNIDGVE VVSLVGRRFD QTKEVADKYG IKHVSTELAD
SLKLPEVDAV ILCTPTQMHA AQAIDCLKAG KHVQVEIPLA DSLKDAQQVV ELQKETKLVA
MCGHTRRFNP SHQFVHKKIK AGEFHIQQMD VQTYFFRRTN MNALGQPRSW TDHLLWHHAA
HTVDLFAYQA GSPIVKANAI QGPIHPTLGI AMDMSIQLKA ANGAICTLSL SFNNDGPLGT
FFRYIGDTGT YIARYDDLVN GKEEKIDVSK VDVSMNGIEL QDREFFAAIK EGREPNASVA
QVLPCYQVLH DLDVQLAKG
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