| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2697 |
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| Symbol | ligJ |
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| ID | 5155646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 2789839 |
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| End bp | 2790864 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640557589 |
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| Product | 4-oxalomesaconate hydratase |
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| Protein accession | YP_001238743 |
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| Protein GI | 148254158 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.745573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.611025 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCATCG ACGTGCACGG CCATTACACG ACGGCTCCGA AGGCGCTGGA AGAGTGGCGC
AACCGGCAGA TCGCGGGCAT CAAGGACGCT TCCGTGATGC CGAAGGCCTC CGAGCTCAAG
ATCAGCGACG ACGAACTGCG CGAGAGCATC GAGGCCAACC AGCTCAAGAA GATGAAGGAG
CGCGGCAGCG ACCTCACCAT CTTCTCGCCG CGCGCGAGCT TCATGGCGCA CCACATCGGC
GACTTCCAGG TGTCCTCGAC CTGGGCCGCG ATTTGCAACG AGCTGTGCTA CCGCGTCAGC
AAGCTGTTCC CGGACCATTT CATCGGCGCC GCGATGCTGC CGCAGTCGCC CGGCGTCGAC
CCCAAGACCT GCATTCCCGA GCTGGAGAAG TGCGTCAAGG AGTACGGCTT CGTCGGAATC
AACCTGAATC CGGATCCGTC GGGCGGTCAC TGGACCTCGC CGCCGCTGTC CGACCGGCAT
TGGTATCCGA TCTATGAGAA GATGGTCGAG CTGGACATTC CCGCGATGAT CCACGTCTCG
ACCAGCTGCA ACGCCTGTTT CCACACCACG GGCGCGCATT ATCTCAATGC CGACACCACG
GCGTTCATGC AGTGCCTGAC CTCGGACCTG TTCAAGGACT TCCCGACCTT GAAGTTCCTG
ATCCCGCATG GCGGCGGCGC GGTGCCGTAT CATTGGGGCC GGTTCCGTGG CCTCGCCCAG
GAGCTCAAGA AGCCGCTGTT GAAGGATCAT CTGCTCAACA ACATCTTCTT CGACACCTGC
GTCTATCACC AGCCCGGCAT CGATCTGCTG ACCGGCGTGA TCCCGGTCGA CAACATCCTG
TTCGCGTCGG AGATGATCGG CGCCGTCCGC GGCATCGATC CGGAGACCGG CTTCTACTAT
GACGACACCA AGCGCTATAT CGAGGCCGCC AAGCTGACCC CCGAGCAGCG CCACCAGATC
TATGAAGGCA ATGCGCGGCG CGTGTTCCCG CGGCTCGACG CCGCGTTGAA GGCCCAGGGC
AAGTGA
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| Protein sequence | MIIDVHGHYT TAPKALEEWR NRQIAGIKDA SVMPKASELK ISDDELRESI EANQLKKMKE
RGSDLTIFSP RASFMAHHIG DFQVSSTWAA ICNELCYRVS KLFPDHFIGA AMLPQSPGVD
PKTCIPELEK CVKEYGFVGI NLNPDPSGGH WTSPPLSDRH WYPIYEKMVE LDIPAMIHVS
TSCNACFHTT GAHYLNADTT AFMQCLTSDL FKDFPTLKFL IPHGGGAVPY HWGRFRGLAQ
ELKKPLLKDH LLNNIFFDTC VYHQPGIDLL TGVIPVDNIL FASEMIGAVR GIDPETGFYY
DDTKRYIEAA KLTPEQRHQI YEGNARRVFP RLDAALKAQG K
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