Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_2686 |
Symbol | |
ID | 5149567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 2778506 |
End bp | 2779678 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640557579 |
Product | putative ABC transporter substrate binding protein |
Protein accession | YP_001238733 |
Protein GI | 148254148 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.192979 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.314956 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTGA GTTCGAAGCT GGCGGGGCTG GGCCTGGCCG CGAGCCTGTT GGCGCAGCCG GCGCTGGCCG CCGACAAGAT CAAGATCGGC GTCATCGTCA CCCTGTCCGG ACCGGCAGCC GCGCTTGGCG GCCAAGTCCG CGACGGCTTC AATCTCGCGA TCAAGGACCT CGGCGGCAAG ATGGGCGGCA AGGACGTCGA GGTGATCGTC GCCGATGACG AGCTCAAGCC GGACGCCGCG ATCACCAAGG TCAAGGGCCT GCTCGAGCGC GACAAGGTCG ACTTCGTCGT CGGCCCGATC TTCTCCAACA TGCTGCAGGC GATCCACCGG CCGGTCACCG AGAACAAGAC CTTCCTGATC AGCCCGAATG CCGGCCCCTC CTCCTATGCC GGCAAGGAGT GCAACCCGTT CTTCTACGTC ACGTCGTATC AGAACGACCA GGTCCATGCG ATCCTCGGCA AGGTCGCGCA GGACCGCGGC TACAAGCGGA TGTATCTGCT GGTGCCGAAC TATCAGGCCG GGCGCGATTC CGTCGCCGGC TTCAAGCTCG ACTACAAGGG CGAGATCGTC GAGGAATCCT ACGTCCCGCT CAACACGCTC GACTTCCAGC CCGAGCTCTC CAAGATCTCC TCGCAGAAGC CGGACGCGGT GTTCACCTTC ATGCCGGGCG GCATGGGCGT GAACCTGGTC AAGCAGTTCA AGCAGGCTGG CCTTGCGGAC ACCATTCCGG TGCTGTCGGC CTTCACGGTC GACGAATCCA CGCTGCCCGC GCAGCAGGAT GCGGCAGTGG GCATGTTCGG CGGCGCCGAC TGGGCTCCCA ATCTCGACAA TCCGCAGAGC AAGAAGTTCG TCGCCGGCTA TGAAGCCGCC TACAACAGCG TGCCGGGAAC CTACGCGATG CAGGCCTATG ATGCGGCGCT GCTGATCGAG AGCGCCGTGA AGGCGGTCGG CGGCGACCTC GCCAACAAGG ACGCGGTGGC GGCGGCACTG AAGAAGGCCG ACTTCACCTC GCTGCGCGGC AGCTTCAAGT TCAACACCAA CGGCTATCCG ATCCAGGACT TCTATCTGAC CAAGGTCGCC AAGCGTCCTG ACGGCAAGTT CCAGACCGAG ATCGTACAGA AGGTGTTCGA GAACTACGCC GACCGCTACG CCAAGGACTG CGCGGCCAAG TAA
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Protein sequence | MKVSSKLAGL GLAASLLAQP ALAADKIKIG VIVTLSGPAA ALGGQVRDGF NLAIKDLGGK MGGKDVEVIV ADDELKPDAA ITKVKGLLER DKVDFVVGPI FSNMLQAIHR PVTENKTFLI SPNAGPSSYA GKECNPFFYV TSYQNDQVHA ILGKVAQDRG YKRMYLLVPN YQAGRDSVAG FKLDYKGEIV EESYVPLNTL DFQPELSKIS SQKPDAVFTF MPGGMGVNLV KQFKQAGLAD TIPVLSAFTV DESTLPAQQD AAVGMFGGAD WAPNLDNPQS KKFVAGYEAA YNSVPGTYAM QAYDAALLIE SAVKAVGGDL ANKDAVAAAL KKADFTSLRG SFKFNTNGYP IQDFYLTKVA KRPDGKFQTE IVQKVFENYA DRYAKDCAAK
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