Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_2641 |
Symbol | rbcL |
ID | 5153528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 2734255 |
End bp | 2735694 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640557536 |
Product | ribulose bisophosphate carboxylase |
Protein accession | YP_001238690 |
Protein GI | 148254105 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAGA AGAGCTATCA GGCCGGGGTC AAGGAATATC GCAAGACCTA TTGGACGCCG GATTATGTCC CGCTCGATAC TGATCTTCTG GCAGTTTTCA AGATTGTCGC ACAGGCCGGC GTGCCGCGCG AGGAAGCTGC TGCCGCCGTC GCAGCCGAGT CGTCGACGGG CACCTGGACC ACGGTTTGGA CAGATCTGCT GACCGATCTC GACTATTACA AAGGCCGCGC CTATCGCATC GAGCCGGTTC CGGGCGACGA CAATGCGTTC TACGCTTTCA TCGCTTATCC GATCGACCTG TTCGAGGAAG GCTCGGTCGT GAACGTGCTG ACCTCGCTGG TCGGCAACGT TTTCGGTTTC AAGGCGGTGC GCAGCTTGCG CCTGGAGGAC ATCCGCTTCC CGCTCGCTTA TGTGAAGACC TGCGGCGGAC CGCCGAACGG CATCCAGCTC GAGCGCGATC GGCTCAACAA ATACGGACGC CCGCTGCTCG GCTGCACCAT CAAGCCGAAG CTCGGCCTGT CTGCGAAGAA TTACGGCCGA GCCGTCTATG AATGTCTGCG CGGTGGCCTC GATTTCACCA AGGACGACGA GAACATCAAC AGCCAGCCGT TCATGCGCTG GCAGCATCGC TTCGAGTTTG TGATGGAAGC CGTGCATAAG GCGACGTCGG AGACCGGCGA GCGCAAGGGG CATTATCTCA ACGTCACCGC GCCGACTCCG GAGGAGATGT ACAAGCGCGC CGAATTCGCC AAATCGCTCG GCGCGCCGAT CATCATGCAC GACTTCCTCA CCGCCGGTTT CACCGCCAAT ACGGGCCTGG CGAACTGGTG CCGTGAGAAC GGCATGCTGC TGCACATCCA CCGCGCGATG CACGCCGTGC TCGACCGCAA TCCGATGCAC GGCATCCATT TCCGCGTCCT GACCAAGTGC CTGCGCCTGT CGGGCGGCGA TCACCTGCAT TCGGGCACGG TGGTCGGCAA GCTCGAGGGT GACCGCGAGG CGACGATCGG CTGGGTCGAC CTGATGCGCG AGCCGTTCGT GCCGGAGAAC CGCGCGCGCG GCATCTTCTT CGATCAGGAT TGGGGCGCGA TGCCCGGCGT GATGCCGGTG GCATCCGGCG GCATCCATGT CTGGCACATG CCGGCGTTGA CCGCGATCTT TGGCGACGAT GCGTGCTTTC AGTTCGGCGG CGGCACGCTC GGTCATCCTT GGGGCAATGC CGCCGGCGCG CACGCCAATC GCGTGGCGCT GGAAGCCTGC GTCGAGGCAC GCAACCAGGG CCGTCCGGTC GAGCGCGAGG GCCGCGAGAT CCTCACCGAG GCAGCGCAGC ACTCGCCCGA GCTGAAGATC GCGATGGAGA CCTGGAAAGA GATCAAGTTC GAGTTCGACG TCGTCGACAA GCTCGACACC GGTCCGATGC TGCGCGTGGT CAACGCCTGA
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Protein sequence | MAEKSYQAGV KEYRKTYWTP DYVPLDTDLL AVFKIVAQAG VPREEAAAAV AAESSTGTWT TVWTDLLTDL DYYKGRAYRI EPVPGDDNAF YAFIAYPIDL FEEGSVVNVL TSLVGNVFGF KAVRSLRLED IRFPLAYVKT CGGPPNGIQL ERDRLNKYGR PLLGCTIKPK LGLSAKNYGR AVYECLRGGL DFTKDDENIN SQPFMRWQHR FEFVMEAVHK ATSETGERKG HYLNVTAPTP EEMYKRAEFA KSLGAPIIMH DFLTAGFTAN TGLANWCREN GMLLHIHRAM HAVLDRNPMH GIHFRVLTKC LRLSGGDHLH SGTVVGKLEG DREATIGWVD LMREPFVPEN RARGIFFDQD WGAMPGVMPV ASGGIHVWHM PALTAIFGDD ACFQFGGGTL GHPWGNAAGA HANRVALEAC VEARNQGRPV EREGREILTE AAQHSPELKI AMETWKEIKF EFDVVDKLDT GPMLRVVNA
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