Gene BBta_2613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2613 
Symbol 
ID5155065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2710914 
End bp2711405 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content65% 
IMG OID640557512 
Productputative general secretion pathway protein G precursor (PilD-dependent protein pddA) 
Protein accessionYP_001238666 
Protein GI148254081 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR01710] general secretion pathway protein G
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTTG AGATGAAGCA CCCCGAGATC AACAGGACGC CCCGGCCGGC CGGGGCTGCG 
CGTCACGAGG ATCAGCGCGG CTTCACGCTG GTCGAGATGC TGGTCGTCAT CGCCATCATC
GGAATGATCA TGGGGCTGAT CGGTCCGCGC GTGCTGTCAT CGCTGAACGA ATCCCGGGTC
AAGACCGCGC GGATTCAGAT CCAGAGTTTT TCGAGCGCGC TCGACCTGTT CTATCTCGAC
ACCGGCCGCT ATCCGACCAC GTCGGAAGGT CTCGCCGCTT TGGTGCGGCC GGTCGCGACG
ATTCCGGGCT GGGCCGGGCC GTATCTCAAA GGCGGCAATG TCCCGAGCGA TCCCTGGAGC
CACGCCTACG TCTATCGCTC GCCCGGACAG CAGGTGCCGT ACGAGATCCT GTCCTATGGG
GCGGACGGGC AGGAGGGGGG CACGGATCTC GCCGCCGACA TCTCCTCCTC GACCCCTGTG
GGTGTGAGAT AG
 
Protein sequence
MDLEMKHPEI NRTPRPAGAA RHEDQRGFTL VEMLVVIAII GMIMGLIGPR VLSSLNESRV 
KTARIQIQSF SSALDLFYLD TGRYPTTSEG LAALVRPVAT IPGWAGPYLK GGNVPSDPWS
HAYVYRSPGQ QVPYEILSYG ADGQEGGTDL AADISSSTPV GVR