Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_2609 |
Symbol | |
ID | 5154452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 2705035 |
End bp | 2707377 |
Gene Length | 2343 bp |
Protein Length | 780 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640557508 |
Product | putative general secretion pathway protein D |
Protein accession | YP_001238662 |
Protein GI | 148254077 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1450] Type II secretory pathway, component PulD |
TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCGGGC GAGTGTTGGC GATTTCTGAT GAGGGCCCTG GTTGGCGGCG ATGCCGTGCG CTCGCCGCGC TGGTCATAGT GTCGATGGTG CTGGCGGGCT GCAATCCGGC GACGCTCGGG AGCGACAGTC GCGGCGACGA CGTGATGGAC AAGGTCGGGC GTCTCGACCT CTCGCCGCGC TATCCGCGAC AGGTCATGCC GGAGCAGTCG CCGGCGGCGC GCCGTGCGCG GGCGGAGATC TACGGCGGCA ATGACGATCC CAGGGACGCA CGTGCGGAAC TGCCGGCGGC GCCATCGCTT CCGGTGCAGG AGGCCGCAGC CCATTCGCAG GCGATCGGCA ACGGCTTCGA GCTGAATTTC GAGAATTCGC CAATCGCGAC CGTGGCCAAG GTCGTGCTCG GCGACGTGCT TGGTGTCGGC TACACCATCG ATCCGCGGAT CCAGGGGACC GTGAGCCTGT CGTCGGTGCG TCCGGTGCCG AAATCGGACG TGGTCTACGT GCTCGAGAAC GCCCTGCGGC TGGCCGGGAC GGCACTTGTA CGTGATAATT CCGGCTATCG CCTGATTCCG CTCGGTGAGG CAGTCGGCGC GGGCAATGTG GATGCGCCCG GTGCTGCGGC CGAGCCCGGC TACGGCATCA CGGTGCTTCC GCTGCAATAT GTCTCGGCAC CGACGCTGCT GAAGCTACTC GACAGCTTCG CACTCAAGCC CGGCACGGTG CGCGCAGACC CGGGCCGCAA CATGTTGTTA ATCCAGGGCA CCGGCTCCGA GCGACGCACG GCGGTCGATG CCGCGCTGAG CTTCGACGCA GACTGGATGA AAGGGCAATC GGTCGGGATC TTCCCGATCG CCAACGGCAA TCCGGAGCCG ATCGTCGCCG AGCTCGAGAA GATCATGGAC ACCGGCGACA GTGGGCTCGG TCAGAACATG GTCAAGTTCC AGACCATCAG CCGGATGAAC GCGGTCATGG TCATCAGCCG CAAGCCGGCA CTGCTGCGCA CCGCCGAGAC CTGGATCAAG CGGCTGGATG CCGGCAACAC GCTCCGCAAC AGCGTTCATG TCTACCGCGT CAAATACGGC GAAGCGCGGC AGATGGCGCG GGTGTTGAAC GAGATGTTCA CGGGAAATTC GGCCAGCGCC GACGCGTCGT CGACGGATCT CGCCCCGGGA TCGGGCGCCG CATCGAGTTC GAGCAGCGAG CGGCTGTCGG CCGCGGGGAC GGCGTCGACA GGCAGTCTCT CGGGTCAGCA GCCCGGCAAC AACGGTCTGG TCGCCAATCG TGGCTTCGGA GGTGCGCCGC CGGCGACCCA GACGAGCCTC GATTCGGCCC CGGAGTCGCG CGCGTCCGCC GGCGGCAGCA AGCCGCTGAT GGACGGCGTG CGCATCACGC CCGACGTGGT CAACAACACG CTGCTGATCT ATGCCGACCG TGAGAACTAC CGCATCATCG AAGCTACCTT GCGACAGTGC GACCGGCCGC AGCTGCAGGT CGCGATTGAT GCCACCATCG CCGAAGTGAC GCTCAACGAC AATCTGAACT ACGGCGTGCA GGCCTATCTG ACCAGCAAGA ATCTTGGCCT GCGGCCAGAT CAAGGCTCAC TCCTCAACAC CACCTCGACA TCGGCGCCGG CGACGGTCGC CTCGGCCGCC GGGACGATCA CCAACGCCTT CTTGAACCGT GCCTTTCCGG GCTTCAATTT CCTGATCGGG TCGGAATCGC AGCCGAGCGC CATCCTGAGC GCGTTGCACA CGGTCACCGA CGTCAAGGTG CTGTCCAATC CTTCGCTGGT GGTGATCGAC AATCAAGCGG CGACATTGCA GGTCGGCGAC CAGGTGCCGG TGTCGACCGG CAGCGCGACG GTGCTGACGA CCAACAACAC GGTCGTGAAT ACGATCGACT ATCGCAATAC CGGGATCATC CTGCGGGTGG CGCCGCGCGT CAACGAGAAC GGCAATGTGC GGCTGGAGAT CGAGCAGGAG ATCAGCAACG TCTCGCCGCA GACCGCGAAC AGCCTCACGC CGACGGTGGC GCAGCGCAAG GTCAAGAGCG CGGTCGCGGT CGCCAGCGGT CAGACCGTGC TGCTGGCTGG CCTCATCAGC GAGACCCATC AGGGTACGCG CAACGGTGTG CCCGGCGTCG ACCAGATCCC GGTGCTGGGC GATCTGTTCA GCAACAACGA TCGCACCCGC GGGCGGACCG AGCTGATCAT CTTCATCCGC CCCCAGATCA TCCGCGACGG CACCGATGCG CATTACGTCG CCGAGGAGCT GCGCTCCAAG CTGCGTGGCA CGATCAGGCC GGTGTCGACG AGCGCCCTTC AGCCGCCGCG GGCCGGCCGA TGA
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Protein sequence | MGGRVLAISD EGPGWRRCRA LAALVIVSMV LAGCNPATLG SDSRGDDVMD KVGRLDLSPR YPRQVMPEQS PAARRARAEI YGGNDDPRDA RAELPAAPSL PVQEAAAHSQ AIGNGFELNF ENSPIATVAK VVLGDVLGVG YTIDPRIQGT VSLSSVRPVP KSDVVYVLEN ALRLAGTALV RDNSGYRLIP LGEAVGAGNV DAPGAAAEPG YGITVLPLQY VSAPTLLKLL DSFALKPGTV RADPGRNMLL IQGTGSERRT AVDAALSFDA DWMKGQSVGI FPIANGNPEP IVAELEKIMD TGDSGLGQNM VKFQTISRMN AVMVISRKPA LLRTAETWIK RLDAGNTLRN SVHVYRVKYG EARQMARVLN EMFTGNSASA DASSTDLAPG SGAASSSSSE RLSAAGTAST GSLSGQQPGN NGLVANRGFG GAPPATQTSL DSAPESRASA GGSKPLMDGV RITPDVVNNT LLIYADRENY RIIEATLRQC DRPQLQVAID ATIAEVTLND NLNYGVQAYL TSKNLGLRPD QGSLLNTTST SAPATVASAA GTITNAFLNR AFPGFNFLIG SESQPSAILS ALHTVTDVKV LSNPSLVVID NQAATLQVGD QVPVSTGSAT VLTTNNTVVN TIDYRNTGII LRVAPRVNEN GNVRLEIEQE ISNVSPQTAN SLTPTVAQRK VKSAVAVASG QTVLLAGLIS ETHQGTRNGV PGVDQIPVLG DLFSNNDRTR GRTELIIFIR PQIIRDGTDA HYVAEELRSK LRGTIRPVST SALQPPRAGR
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