Gene BBta_2592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2592 
Symbol 
ID5155492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2685326 
End bp2686243 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content64% 
IMG OID640557496 
ProductABC transporter permease 
Protein accessionYP_001238650 
Protein GI148254065 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.188243 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATCA TGTCAATCAC ATCTTCCCAT TCGTCGACGC CTCTGGCGTC CCGCTCGCTC 
GCGCGGCGCG TGTTCGACAG AGCGGTGGCG TCGCCCGGGT TTCGCGTCGG GGCGGCGATC
TTCCTTGCGC TCGTGCTCGC GACGGCTCTG TATCCCGAGT TGAGCGCCAT CGATCCCACC
AAGATGGACG TCAAGGCGCG GCTTCTCCCG CCGCTGTTCA CCGGAACGAA CTGGAACTGG
GGTCATCCCC TGGGCACCGA TCAGATCGGC CGCGATATGC TGGTCCGCTC CCTGGTCGGG
CTGCGCTACT CGTTCCTGAT CGGCATGGCC TCGGTGATCG TCATGCTGAT CGTCGGCTGC
GCTCTCGGCA CGGTCGCCGG CTATTTCGGC GGACGCACCG ATGCCGTCAT TATGCGCCTC
ACGGATGCCC AACTCTCGAT CCCCATGATC ATCCTCGCCA TCGCCGTGCT CGGCGTGTCG
CGTCCGACCA TTCCCGCCAT TGTTCTCGTG CTCGGCATTT CGAACTGGCC CGTCTATGCG
CGCATGATGC GTAGCGTTGT CATGACCGAG CGCCAGCGCG AGTTCGTCCG GGCGGCGAAG
ATCGGCGGAT CGACCGATCT GCGCATCATC GTCACGCTGC TGTTGCCGCT GCTCCTGCCG
TCGGTACTGT TCTCCTCGGT GCTGGACGTC GCGCGCATGA TGATCTTCGA ATCGACGCTC
GGTTTCCTCG GCCTCGGCGT CCAGCCGCCG ACTCCGACCT TCGGCAACAT CATCGCCGAT
GGCCGCAAGT ACCTGCTCAA CGCGTGGTGG ATCGCGACCA TGCCAGGACT GTTCCTGGGT
CTGACCCTGA CCAGCATCAA CCTAATGGGT GCAGCGCTCG AGCGGGCGCG CGACACCGTT
CACGCCGGAG GTGAATGA
 
Protein sequence
MSIMSITSSH SSTPLASRSL ARRVFDRAVA SPGFRVGAAI FLALVLATAL YPELSAIDPT 
KMDVKARLLP PLFTGTNWNW GHPLGTDQIG RDMLVRSLVG LRYSFLIGMA SVIVMLIVGC
ALGTVAGYFG GRTDAVIMRL TDAQLSIPMI ILAIAVLGVS RPTIPAIVLV LGISNWPVYA
RMMRSVVMTE RQREFVRAAK IGGSTDLRII VTLLLPLLLP SVLFSSVLDV ARMMIFESTL
GFLGLGVQPP TPTFGNIIAD GRKYLLNAWW IATMPGLFLG LTLTSINLMG AALERARDTV
HAGGE