Gene BBta_2559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2559 
Symbol 
ID5154010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2645842 
End bp2646591 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content68% 
IMG OID640557467 
ProductABC transporter ATP-binding protein 
Protein accessionYP_001238621 
Protein GI148254036 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.209656 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTTC TCACGGTAAC CGGCCTGGTC CGTCGTTTCG GATCGCTGCG CGCGGTCGAC 
GGACTCGTGC TGTCCGTGGA GCCAGGGCAG ATCCATGCGC TGATCGGTCC CAACGGCGCC
GGCAAGACCA CGGCCTTCAA CTGCATCTCC GGCTTTCTGG CGCCGACGGC GGGCCGCATC
GAGCTCGACG GCTGCGACGT CACGGGATGG CCGTCGCACC GGCTGGTCTC GGCCGGGCTT
TCGCGCACCT TCCAGGTGAC GAAGGTGTTC GACGACATCA GCGTGCGCGA GAACGTCGCG
CTCGGCGTGC GATCGCGCCT GCGCATGAAC CGCCGCTTCT GGCCCGGCGG CGCCGCAGTC
TCTGCGGTGA CGAAGATATG CGACGAGATC CTCGACACCG TGGGGCTCAC GGCACGCGCG
CAAAGCGCGG CCAGCGAGCT CTCGCATGGC GAAAGGCGGG TGCTTGAAAT CGCCATATCG
CTGTCTGTCG CGCCGAAGCT GCTGATGCTG GACGAGCCGA CGGCGGGAAT GTCCGCCGGC
GATGCCGGTC TGATCGGCCG GCTGGTGCGC CAGCTGGCGC GCACCACGGC GGTGCTGCTG
GTCGAGCACG ATATCGATCT CGTGCTGGGA CTGTCGGACC GGATCACGGT GATGGCACAG
GGGCGGGCGA TCGCGACCGG CACGCCGGAG GCGGTCAGCC GGGATGCGGC CGTGCAAGAG
GCCTATCTGG GACGGAGTGT CGATCGATGA
 
Protein sequence
MALLTVTGLV RRFGSLRAVD GLVLSVEPGQ IHALIGPNGA GKTTAFNCIS GFLAPTAGRI 
ELDGCDVTGW PSHRLVSAGL SRTFQVTKVF DDISVRENVA LGVRSRLRMN RRFWPGGAAV
SAVTKICDEI LDTVGLTARA QSAASELSHG ERRVLEIAIS LSVAPKLLML DEPTAGMSAG
DAGLIGRLVR QLARTTAVLL VEHDIDLVLG LSDRITVMAQ GRAIATGTPE AVSRDAAVQE
AYLGRSVDR