Gene BBta_2545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2545 
Symbol 
ID5154101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2631580 
End bp2632461 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content64% 
IMG OID640557454 
Productputative branched-chain amino acid ABC transporter, permease protein 
Protein accessionYP_001238608 
Protein GI148254023 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.281842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.322886 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCT TCATTGAAAC CCTGGTCGGC GGCCTGCTTG CGGGTGTGAT GTATTCGCTG 
GTGGCGATCG GCTTCGTGCT GGTCTTCAAG GCATCCGGCG TATTCAATTT CGCGCAAGGG
TCGATGGTGC TCTGCGCGGC GCTCACCTTC GTCACCCTGC GTGACAAGGA GATTCCGTTC
TGGCTGGCGG CGGTGATCAC GCTTGCGATC ATGGTTGCGA TCGCTATCCT CATCGAGCGC
GTGGTATTGA GGCCGCTGGT CAACCGGCCC CAGATCACAC TGTTCATGGC GACGCTGGGA
CTGTCCTTCG TGATCGAGGG ATTGGCGCAG ATCGCGATGG GCGCCAGCGT GCATGAGCTC
GATCTCGGCA TCATCGACAC CCCGGTCAAG TTCGGCGATG TCCAGGTCAG CCAGTTCGAT
CTCGTCGCGG CAGGTACGGC TGCGGTCCTC GTCGCCGCGC TGTCGATCTT CTTCAGCAGG
ACGCGTACCG GCATCGCGCT GCGCGCCATC GCCGATGATC CCCAGGCGGC GCTGTCGATC
GGCATCCGGC TGCAGTCCCT GTGGCAGATC GTGTGGGGCG TGGCTGGATT CGTGTCGCTG
GTCGCAGGCC TGCTGTGGGG CGCCCGCCAG GGCGTTCAAT TCGCGCTGAC GCTGGTCGTG
CTGAAGGCGC TGCCGGTGCT GATCATCGGC GGCTTCACGT CCATTGCCGG TGCCATCGTC
GGCGGCCTCA TCGTCGGCGC CAGCGACAGC CTCGCCGAGA TCTATCTCGG CAATCTGCTC
GGAGGCAGCG TCTCGACCTG GTTCTCCTAC GTGCTCGCGG TGGCCTTCCT CCTGGTCCGG
CCCGCCGGTT TGTTCGGCGA AGCGCCGATC GAAAGGATCT GA
 
Protein sequence
MSFFIETLVG GLLAGVMYSL VAIGFVLVFK ASGVFNFAQG SMVLCAALTF VTLRDKEIPF 
WLAAVITLAI MVAIAILIER VVLRPLVNRP QITLFMATLG LSFVIEGLAQ IAMGASVHEL
DLGIIDTPVK FGDVQVSQFD LVAAGTAAVL VAALSIFFSR TRTGIALRAI ADDPQAALSI
GIRLQSLWQI VWGVAGFVSL VAGLLWGARQ GVQFALTLVV LKALPVLIIG GFTSIAGAIV
GGLIVGASDS LAEIYLGNLL GGSVSTWFSY VLAVAFLLVR PAGLFGEAPI ERI