Gene BBta_2542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2542 
Symbol 
ID5153947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2628062 
End bp2629162 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content65% 
IMG OID640557451 
Productputative maltose/maltodextrin import ATP-binding protein malK 
Protein accessionYP_001238605 
Protein GI148254020 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.441686 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGGA TCGAGCTCAC AGGCCTCAAC AAGGACTTCG CGGGTCGGCA GGTTCTCAGC 
GATATCAATC TGTCGATTGC AGAGGGGGAA TTTCTCGCGC TGGTCGGACC GTCCGGCTGC
GGCAAGTCGA CCCTGTTGCG TGTGATCGCT GGTCTCGAGC CGATTTCGTC CGGCAGCGTC
GCTTTCGACG GCGAGCCCGT GGATACGTTG CCGCCGCAGG CGCGCAACAT TGCCATGGTG
TTTCAGTCCT ACGCGCTCTA CCCGCATATG AAGGTCCGGG ACAATCTGGC GTTTGGATTG
AAGCAGCATG GGCTGCCGCG CAGCGAGCGC GACCGGCGCA TCGCCGTGGC CGCGCAGGCG
CTCGAACTGG AGCCGCTGCT CGATCGGTAT CCACGAGCCT TGTCCGGTGG CCAGCGCCAG
CGCGTGGCGC TGGGACGCGC CATGGTCCGC GAGCCTCGCG CGTTTCTGCT GGACGAGCCG
TTGTCCAATC TCGATGCGCA ATTGCGGGTC TCGACCCGGC TCGAAATCCG GACGCTGCAG
AAGCGGCTCG GCATGACCAT GATCTACACC ACCCACGACC AGGTCGAAGC CATCACGCTG
GCCGACCGGA TCGCGGTCAT GAGTGCCGGC CGCATCGTTC AGGTCGCGAC GCCGCTCGAC
CTCTATGATT TTCCCGCCAA CCGCTTCGTT GCGGGATTCA TCGGCTCGCC TGCGATGAAT
TTCATTCCGG GGACCCGTCG GGCTGACGCC ATCCATACGG CAGGCGGCGC CGTGATCGGG
CTGCCCGAAG GCGACGTCGA CGGGCCTGAT GACATCGTGG TCGGGCTCAG GCCAGAGCAC
CTGACGCTGG ACATCGACAG CGTTCCCGCG GCGCATCGTC TTGACGCGAC CGTGCGCCAT
GTCGAAAATC TCGGCTCGGA GGCCGAGATT TATGTCGAGG CAGGCGGGAC CCGCCTGTGT
CTGCGACATT TCGGCCGGCG CCTCCCGGAC ATCGGCACTC AGGTTCGGAT CGGCTTCGAT
CCCGCCCGTC TTCATTTGTT CGACGCCCGT TCCAATGAGC GGATCGGACC GCGCCATGAC
ACGCGTGTGA ATGCGTCGTG A
 
Protein sequence
MARIELTGLN KDFAGRQVLS DINLSIAEGE FLALVGPSGC GKSTLLRVIA GLEPISSGSV 
AFDGEPVDTL PPQARNIAMV FQSYALYPHM KVRDNLAFGL KQHGLPRSER DRRIAVAAQA
LELEPLLDRY PRALSGGQRQ RVALGRAMVR EPRAFLLDEP LSNLDAQLRV STRLEIRTLQ
KRLGMTMIYT THDQVEAITL ADRIAVMSAG RIVQVATPLD LYDFPANRFV AGFIGSPAMN
FIPGTRRADA IHTAGGAVIG LPEGDVDGPD DIVVGLRPEH LTLDIDSVPA AHRLDATVRH
VENLGSEAEI YVEAGGTRLC LRHFGRRLPD IGTQVRIGFD PARLHLFDAR SNERIGPRHD
TRVNAS