| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2519 |
|---|
| Symbol | |
|---|
| ID | 5153594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 2603376 |
|---|
| End bp | 2603852 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640557430 |
|---|
| Product | BadM/Rrf2 family transcriptional regulator |
|---|
| Protein accession | YP_001238584 |
|---|
| Protein GI | 148253999 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.969367 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.623317 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTCCG CGAAGGGAAA ATACGGCCTC AAGGCCCTGA TCCATCTGGC CTCGCTGGAG
CCGGGTGAAC AGGCGCTGTC CGCAGACATT GCCGAAACGA ACAATATTTC GAAGAAATTC
CTCGACGCGA TCCTGCGCGA ATTGCGACAG GCCGGTCTCG TCCGGGCCAA GAAGGGTCCT
GGAGGCGGCT ATGCCCTCGC GCGACCCGCC CGCTCGATCA AGGTCGGCCA GGCGATCCGC
CATCTCGACG GGCCCCTCGC CCCGATCGCC TGCGCGAGCC GATCGGCCTA TCGGCCGTGC
CGCGACTGCC GGGATCCGAA AGCCTGCGCT GTGCGACTCA CCATGACCCA GGTCCGCGAT
GCGATCTCCG GCGTGCTCGA CCAGATGACC CTCTACGAGC TCGCCGAGCA GGAGCGCCGG
CCGGCACGGA CGTCCCACCC GCAGCGAGCT GCGGGCATGG GCGGTAGCCG CGGCTGA
|
|---|
| Protein sequence | MLSAKGKYGL KALIHLASLE PGEQALSADI AETNNISKKF LDAILRELRQ AGLVRAKKGP
GGGYALARPA RSIKVGQAIR HLDGPLAPIA CASRSAYRPC RDCRDPKACA VRLTMTQVRD
AISGVLDQMT LYELAEQERR PARTSHPQRA AGMGGSRG
|
|---|
| |