Gene BBta_2510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2510 
Symbol 
ID5153396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2595333 
End bp2595983 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content68% 
IMG OID640557422 
Productmethylthioribulose-1-phosphate dehydratase 
Protein accessionYP_001238576 
Protein GI148253991 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID[TIGR03328] methylthioribulose-1-phosphate dehydratase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.490663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAC GCCAGCCTGC CATCGCCGAT ACGGCGCTCG TCACTGCTAT CGATGCCGTG 
ATCGAGGCCG GGCGGCGGTC GGCCGAGCGC GGCTGGGTGC CGGCGACGTC GGGCAATTTT
TCGGTCCGGG TCGATGCCGA GCGGATCGCC GTGACCCGCT CCGGTGTCGA CAAGGGACGG
CTCACGCCCA ACGACGTGCT GTGTCAGCAG CTGAGCCAGC CGCTGGTTGC CGGCAGCTCG
GCCGAAGCCG AGCTGCATCG GCGGCTCTAT GCCGATGATG CCGAGATCGG CGCGGTCTTT
CACACCCACG CGGTGTCGGC GACCGTCCTT GCTCAACTGC ACCGTGGCGA ACGGCTGCTG
ACGCTGAGCG GTTGGGAGTT GCAGAAGGCC CTGGCGGGCA TCCGCAGCCA TGAGACCGTG
GTGGAGGTGC CCGTCGTCGC CAATGATCAG GACGTCGTCG CGCTGGCGAA CGAGGTCGCG
GCCCGGCTGG CGGCGCCGGT CGCTGCCGGC GCCGTGCGTG CGCCGGGCTA TCTCATCGCC
GGCCACGGCC TCTATGCCTG GGGACATACG GCAGTCGATG CGTTCCGGCA TCTGGAAGCG
CTGGATGTGC TGTTCACCCA GATTCTCACG CTCAGGAGAC ATGCATCATG A
 
Protein sequence
MSARQPAIAD TALVTAIDAV IEAGRRSAER GWVPATSGNF SVRVDAERIA VTRSGVDKGR 
LTPNDVLCQQ LSQPLVAGSS AEAELHRRLY ADDAEIGAVF HTHAVSATVL AQLHRGERLL
TLSGWELQKA LAGIRSHETV VEVPVVANDQ DVVALANEVA ARLAAPVAAG AVRAPGYLIA
GHGLYAWGHT AVDAFRHLEA LDVLFTQILT LRRHAS