| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2484 |
|---|
| Symbol | solA |
|---|
| ID | 5152952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 2571586 |
|---|
| End bp | 2572773 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640557400 |
|---|
| Product | N-methyltryptophan oxidase |
|---|
| Protein accession | YP_001238555 |
|---|
| Protein GI | 148253970 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | [TIGR01377] sarcosine oxidase, monomeric form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCATT ATGATGTGAT CGTGATCGGC TGCGGCGCGG TCGGCAGCGC CGCCATGCTG
CACCTTGCGA AAGCGGGACG CCGCGTGCTC GGCATCGACC GCTTCCAGCC GCCGCATCGC
TTCGGCTCGA CCCATGGCGA GACCCGCATC ACCCGCGCCG CGATCGGCGA GGGCGTCGAC
TACACGCCGC TGGCGCGGCG TTCGCACCAG ATCTGGCGCG AACTGGAGCG CGAGACCGGC
ACCCACCTGT TCCAGCAATG CGGCTGCCTG TTCATTCCGA GCCAGCACGG CGGCGCAGTG
CACGGCGTCA GCAGCGGACA GTTCTTCGCC AATATCGAGG CTGCGGCACG GCTGCACGGG
GTCGACGGCG AGACCCTCTC CGCGGAGCGG CTCCGCGCCG ACTATCCGGC CTTCGCCACC
GCGCCGGGCG ACCGCGCCTT TCTCGATCGC GAGGGCGGCT ATCTCCTGGT CGAGGATTGC
GTGCGCACCG AGCTTGTCGT CGCCGCACGC CATGGCGCGG AGCTCGTGAC CGGACGGCGC
GTCACCGCGT TCCGCCGCGC GGCCGGCGTG CTCAGCGTCA CGCTGGAGGA CGGCACGACC
ACCTCCGCGA CGACGCTGAT CGTCACCACC GGCCCGTGGA TCACCGAGAT GATCGCGCCA
TTGCGCCGCC GCGTCCACAT CACCCGCCAG GTGCTGTACT GGTTCGAGAT CCTGTCCAAC
CCGCAGCGCT TCGGTCCGGA CGCGCCGGTC TTCATCTGGG ACGTCACCGG CCGCGCCGGC
GCTGCATCCG ACATCTACGG CTTTCCCTGG CTCGGCTCGC CCGGCAACGG CGTCAAGCTC
GCCAACGAGG TCATGACCGG CGAGACCGAT CCCGATCACG TCGGCCGCGA GGTCACCGCG
GACGAGATCG CGGCCACCTA CGAGACCTAT GTCCGCCCGT TCGTGCCCGA TCTCGGCCCT
AAATGCCTGC GCAGCGAGGT CTGTCTCTAC ACCAATGCCA GCGGCGGGCG CTTCATCATC
GACCGCGATC CCGGCGCCCC CGAGGTGATC TATGCCTCGG CCTGCTCGGG CCACGGCTTC
AAGCATTCGC CGGCCGTCGG CGAAGCGCTC GCGGCGATGG CGCTGGGCCA GGCGCCGCTT
GTCGATCTCT CCGGCTTTAC GCTGGACCGG CTGGCCGCCG CCCCCTGA
|
|---|
| Protein sequence | MPHYDVIVIG CGAVGSAAML HLAKAGRRVL GIDRFQPPHR FGSTHGETRI TRAAIGEGVD
YTPLARRSHQ IWRELERETG THLFQQCGCL FIPSQHGGAV HGVSSGQFFA NIEAAARLHG
VDGETLSAER LRADYPAFAT APGDRAFLDR EGGYLLVEDC VRTELVVAAR HGAELVTGRR
VTAFRRAAGV LSVTLEDGTT TSATTLIVTT GPWITEMIAP LRRRVHITRQ VLYWFEILSN
PQRFGPDAPV FIWDVTGRAG AASDIYGFPW LGSPGNGVKL ANEVMTGETD PDHVGREVTA
DEIAATYETY VRPFVPDLGP KCLRSEVCLY TNASGGRFII DRDPGAPEVI YASACSGHGF
KHSPAVGEAL AAMALGQAPL VDLSGFTLDR LAAAP
|
|---|
| |