Gene BBta_2477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2477 
Symbol 
ID5152969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2563120 
End bp2563857 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content67% 
IMG OID640557393 
Productputative rRNA methylase 
Protein accessionYP_001238548 
Protein GI148253963 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.382282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCCTC CCCGCAAACG CGCTGATGTC CTCCTCGTCG AACGCGGTCT TTTCGAGAGC 
CGCGCGCGGG CGCAGGCGGC GATCGAGGCG GGACTGGTGT TCGCCAATGA CAAGCAGGTG
GCCAAGGCGT CGGAGACCGT GCCCGCCGAC GCCTCGCTGC AGGCCGAGCC GGCGCATCCC
TGGGTGTCGC GCGGCGGCGT CAAGCTTGCG GCTGCGCTGG AGCATTACGG CATCGAGGTC
GAGGAGCATG TCTGCCTCGA TGTCGGCGCG TCGACCGGCG GCTTCACCGA GGTGCTGCTG
GCGCATGGCG CGGCCCTCGT CTTCGCGGTC GATGTCGGCC GTGACCAGTT GCATCCGTCG
CTGCGCAATC ATTCCAGGAT CGTGTCGATG GAGCAGACCG ATATCCGCAG CTATGAGGGA
AAGCGCCTGC CACAGCGGCC CGATGTGGTC GTGATCGACT GCAGCTTCAT CTCGCTCAAA
TCGGTGTTGC CGGTGGCGCT GTCGCTGGCT GCGTCGCCGA TGAGCCTGCT GGCGCTGATC
AAGCCGCAAT TCGAGGCGCA GGGTAAGCAC GGCAAGGGCG GCATCATCAA GGACGCCGCC
GTCCACCAGG CGGTCTGCGA CGACGTCGCG GCCTTCGCGG CCGCGCTCGG CTGCAGCGAC
ATCGAGATCT TTCCATCCTG CATCAAGGGC GGCGACGGCA ACGCCGAATT CTTCCTGGGA
GCGCGCCGCC ATGGTTGA
 
Protein sequence
MSPPRKRADV LLVERGLFES RARAQAAIEA GLVFANDKQV AKASETVPAD ASLQAEPAHP 
WVSRGGVKLA AALEHYGIEV EEHVCLDVGA STGGFTEVLL AHGAALVFAV DVGRDQLHPS
LRNHSRIVSM EQTDIRSYEG KRLPQRPDVV VIDCSFISLK SVLPVALSLA ASPMSLLALI
KPQFEAQGKH GKGGIIKDAA VHQAVCDDVA AFAAALGCSD IEIFPSCIKG GDGNAEFFLG
ARRHG