| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2456 |
|---|
| Symbol | |
|---|
| ID | 5152112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 2545557 |
|---|
| End bp | 2546768 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640557374 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001238529 |
|---|
| Protein GI | 148253944 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3921] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.926406 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAGCG CGGCGCTGGC AGTGATCGCA TTGAGCTGGC TCATGGCTGC CGCGCCGGCG
GCCGCAAGGT CGCGCGAGGC GGGCCATCCC CGGGCCCATG CTGCACCCGG GCCGTCGCGC
AATGAGCCCG CGATAGCGAC GGTGCCGCTG CCGCAGCCGC GCCCCGAAGC GGCGCCGCCG
CGTGTCCGGG CCGGCGCTGG GGCAACCGAT TCGGCCGGCA CTGGCGGGAA GGCCGCCGCG
AAGGGCGAGC CGGGAGCTGC GCGGCAGGCG CAGGAGAGGG CTGGGAACGA GGCTGGGACC
GACGCCAAGT CGGACGTCAA GTCGGACGTC AAGCCGGACG CCAACGCCGA TCCCAGGGCC
CTGCAGGTGC CGCAGCCATC GGCCTGCCGC CTCGCTTTGA CCGAGGAGAT CGCGGTGGCG
CCATCAATTC CGCCGATCAA GGGGCCGGGG GCTTGCGGTG GCGACGACCT GGTGCGCCTG
GAAGCCGTGG TGCTGCCGGA CAAGCGGCGG GTGGCCGTGA CCCCGGCGGC GATCATGCGT
TGTCCGATGG CGTCGGCGAT CGCGTCCTGG GTCCGCTCCG ATGTCGTGCC CCTCCTGCAA
TCGCTCGGCA GCCCGCCCGC CGTCCTGGAT AATTTCGATG CCTATGAGTG TCGCGGCCGC
AACCGTGTCA GCGGCGCCCA ACTTTCCGAG CATGGCCGCG CCAATGCGAT CGATGTGCGC
GGCTTCAAGC TGGCCGACGG CCGCATGATC GAGCTGACCG ACCGGACCCA GCCGCGGGAG
CTGCGTGAGG CCGTGCTGCA TTCCGTGTGC ACGCGCTTCA CAACCGTGCT GGGGCCTGAT
TCCGACTGGT ATCACGAGGA CCACATCCAT CTCGACCTCG CCGAGCGGCG CAGCAATTAT
CGCATCTGCC AATGGGACGT GCTGGATCCG CTCCCGCAAA TCGCGCCGTT GATGCCGGCG
GTGCGTCCCG ACGGGGCGCC GCCGCGGGAG ACGGCCGAGG GGGCCGAGGA GGGCAAGGTC
GGCAAGCCTG CGCGCGGAGC AGCGGCTGGT GAAGCAACGC CCGCCGAGCC GCAGAGAGCG
GCGCCGTCAG AGCCGGGTTC AGCCGATGCT GCCGCGGCGG ACGCCGAAGA GGCAGAGACG
GCGACACCCC CGCCACCGCC CCAGCCCGCG CCCGCGAAGG CGGGCAAGAG AAGGCATCGG
AGCCGGTCTT GA
|
|---|
| Protein sequence | MVSAALAVIA LSWLMAAAPA AARSREAGHP RAHAAPGPSR NEPAIATVPL PQPRPEAAPP
RVRAGAGATD SAGTGGKAAA KGEPGAARQA QERAGNEAGT DAKSDVKSDV KPDANADPRA
LQVPQPSACR LALTEEIAVA PSIPPIKGPG ACGGDDLVRL EAVVLPDKRR VAVTPAAIMR
CPMASAIASW VRSDVVPLLQ SLGSPPAVLD NFDAYECRGR NRVSGAQLSE HGRANAIDVR
GFKLADGRMI ELTDRTQPRE LREAVLHSVC TRFTTVLGPD SDWYHEDHIH LDLAERRSNY
RICQWDVLDP LPQIAPLMPA VRPDGAPPRE TAEGAEEGKV GKPARGAAAG EATPAEPQRA
APSEPGSADA AAADAEEAET ATPPPPPQPA PAKAGKRRHR SRS
|
|---|
| |