Gene BBta_2428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2428 
Symbol 
ID5151745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2515222 
End bp2516409 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content65% 
IMG OID640557346 
Productputative branched-chain amino acid ABC transporter, periplasmic substrate- binding protein 
Protein accessionYP_001238501 
Protein GI148253916 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.600985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCGG CAGGCCTGGG CCTTGCCGTC GCGGGACTTG CGGGCGCGGC GCGCGCCGAG 
GACGTCATCA AGATCGGCGA GATCAACAGC TACTCGCTGC TGCCGGCTTT CACCGAGCCC
TATCGCAAGG GCTGGCAGCT GGCGGTCGAG GAGGTCAATG CGGCCGGCGG CATCAACGGC
AAGAAGCTCG TCGTCGTCTC CAAGGACGAC AGCGGCAAGC CGGCCGACGC GCAGACCGCC
GCCAACGAGC TGGTGTCGAG CGAGAATGTC GCGATGCTCG CCGGTACCTT CCTGTCGAAT
ATCGGCCTCG CCGTCAGCGA CTTCGCCAAC CAGAAGAAGG TATTCTTCCT GGCGGCCGAA
CCGCTGACCG ACGCCATCAC CTGGGCAAAG GGCAACAAAT ACACCTTCCG TCTGCGTCCG
TCGAACTACA TGCAGGCGGC GATGCTGGTG GAAGAAGCCG CCAAGCTGCC GGCCAAGCGC
TGGGCGACGA TCGCGCCGAA CTACGAATAT GGCCAGTCGG CCGTCGCGGT GTTCAAGAAG
CTGCTCTCCG AGAAGCGCCC GGATATCCAG TGGGTCGACG AGCAGTGGCC GCCGCAGGGC
AAGATCGATG CGGGTCCGGT GGTGCAGGCC GTCGCCGCCG CCAATCCGGA AGCGATCCTC
AACGTCACCT TCGGCGCCGA TCTCGTCAAG CTGGTCCGCG AGGGCAACAC GCGCGGCCTG
TTCAAGGACC GCAAGGTCGT GAGCTTCCTC ACCGGCGAGC CGGAATATCT CGATCCGCTC
AAGGAGGAGA CGCCAGAGGG CTGGATCGTC ACCGGCTATC CCTGGTACTC GATCAAGACG
CCCGAGCATG ATGCGTTCCT GAAGGCCTAC CAGGCCAAGT ACAACGACTA TCCCCGGCTC
GGCTCGATCG TCGGCTACCA GACCATCAAG TCGGCGGCCG CCATTCTCGC CAAGGCCGGC
TCGACCGATG CCGACAAGCT GATCGCTGCC GCCGAGGGCC TGTCCGTGCC ATCGCCGTTC
GGCGAGATCA CCTTCCGCAA GATCGACCAC CAGTCGACGC TCGGCGCCTA CGTCGGCAAG
ACCGCGCTGA AGGACGGCAA GGGCATCATG GTCGACACCG TCTATCGCAA GGGCTCGGAC
TATCTGCCCA GCGATGAAGA GGTCGGCAAG CTCCGGCCGA AGGACTGA
 
Protein sequence
MLAAGLGLAV AGLAGAARAE DVIKIGEINS YSLLPAFTEP YRKGWQLAVE EVNAAGGING 
KKLVVVSKDD SGKPADAQTA ANELVSSENV AMLAGTFLSN IGLAVSDFAN QKKVFFLAAE
PLTDAITWAK GNKYTFRLRP SNYMQAAMLV EEAAKLPAKR WATIAPNYEY GQSAVAVFKK
LLSEKRPDIQ WVDEQWPPQG KIDAGPVVQA VAAANPEAIL NVTFGADLVK LVREGNTRGL
FKDRKVVSFL TGEPEYLDPL KEETPEGWIV TGYPWYSIKT PEHDAFLKAY QAKYNDYPRL
GSIVGYQTIK SAAAILAKAG STDADKLIAA AEGLSVPSPF GEITFRKIDH QSTLGAYVGK
TALKDGKGIM VDTVYRKGSD YLPSDEEVGK LRPKD