Gene BBta_2388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2388 
Symbol 
ID5149985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2477620 
End bp2478126 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content68% 
IMG OID640557308 
ProductMarR family transcriptional regulator 
Protein accessionYP_001238463 
Protein GI148253878 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGC GACATTCACC GAAGGCACGT CCGGCCAAGC CGACGGCGGC CGCATGGCGT 
CACGCCAATG TCGGCCGGCT GCTCAACAAT GCGGTGCGCC GGTTCGAGTC GCGGGTTCTC
GAACTCATGG CGGCCAGCGG TCACGGCGCG ACGCGCATCG CCCATGTCAG CCTCACCCGC
AATCTCGACG TCGACGGCAC GCGGCTGACC GAGCTTGCGC GCCGCGCCTC GATGAGCAAG
CAGGCGATGG GCGAGCTGGT CGACCAATGC GCGGAGCTCG GGCTGGTCGC GCGCGAGGTC
GATCCGCAGG ACGGGCGTGC GCGCATCGTG CGCTTCACGC CGGCCGGCAT GAAATGGCTT
CAGGCATTCG GCGATGCCGT CGACGTGGCC GAGGCGGAGA TGCGCAAGGA GCTCGGCAAG
GCAGCGATGG AAGCGATCGT CGAGGGCCTG TCGGCCTATG GTGCGCGCTT CGATACGCTG
GGTCCGTCAG ATAGTCAGGT TACTTGA
 
Protein sequence
MTARHSPKAR PAKPTAAAWR HANVGRLLNN AVRRFESRVL ELMAASGHGA TRIAHVSLTR 
NLDVDGTRLT ELARRASMSK QAMGELVDQC AELGLVAREV DPQDGRARIV RFTPAGMKWL
QAFGDAVDVA EAEMRKELGK AAMEAIVEGL SAYGARFDTL GPSDSQVT