| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2346 |
|---|
| Symbol | |
|---|
| ID | 5149921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 2432791 |
|---|
| End bp | 2434449 |
|---|
| Gene Length | 1659 bp |
|---|
| Protein Length | 552 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640557268 |
|---|
| Product | putative electron transfer flavoprotein dehydrogenase |
|---|
| Protein accession | YP_001238424 |
|---|
| Protein GI | 148253839 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0644] Dehydrogenases (flavoproteins)
[COG2440] Ferredoxin-like protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.398943 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0520477 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG AAGAATTACC CGAGCGCGAA TCCATGGAGT TTGACGTCGT CATCGTTGGC
GCCGGCCCCT CGGGCCTGAC CGCCGCGATC CGGCTGAAAC AGCTCAATGC CGACCTCACC
ATCGTGGTCG TCGAGAAGGG CTCCGAGGTC GGCGCGCACA TTCTGTCGGG GGCCGTGATC
GATCCGCTCG CGCTGGACAA GCTGATCCCG GACTGGCGGT CGGACGACGA TTGCCCGCTG
AAGACCCCGG TCAAGGACGA CAAGTTCTTC TGGATGACCA AGAGCGGCGC GATCAAGCTG
CCGGGCTTTG CGATGCCGCC ATTCATGGAC AATCACCATT GCTACATCGG CTCGCTCGGC
AATGTCTGTC GCTGGCTGTC GCGCAAGGCC GAGGCGCTCG GCGTCGAGAT CTATCCGGGC
TTCGCGGCAA CCGAGGTGCT GTATGACGAG CAGGGCGCGG TGCGCGGCAT CGCCACCGGC
GACATGGGTA TTGCCAAGGA CGGCAAGCCG AAGGCCTCGT TCACGCGCGG CATGGAGCTG
CTCGGCAAGT ACACGCTGTT CGCGGAAGGC GCGCGCGGCA GCCTGTCCAA GCAGCTGATC
GCGAAATTCG CCCTCGATGC CAAGAGCGAG CCGCCGAAAT TCGGCATCGG CCTGAAGGAA
GTCTGGCAGA TCGATCCCGC CAAGCACCAG AAGGGACTGA TCCAGCACTC GTTCGGCTGG
CCGCTCGACA TGAAGACCGG CGGCGGCTCG TTCCTCTATC ACTACGACGA CAATCTGGTC
GCGGTCGGCT TCGTCGTGCA TCTGAACTAC GACGATCCCT ATCTGTCGCC GTTCGAGGAA
TTCCAGCGCT TCAAGACGCA TCCCTCGATC CGCGGCGTGT TCGAAGGCGG CAAGCGCCTG
GCCTATGGCG CGCGTGCCAT CACCGAGGGC GGCTATCAAT CGGTGCCGCG GCTGTCGTTC
GCCGGCGGCG TGCTGATCGG CTGCGCGGCA GGCTTCGTCA ACGTGCCGCG CATCAAGGGT
GTGCACAATG CGATGGGCAG CGCCATGCTG GCGGCCGAGC ATGTCAATGC GGCGCTCGCG
GCCGGCCGCG CCAATGACGA ACTGGTCGAC TACGAGAACG CCTGGCGCTC ATCGCCGGTC
GGCGAGGACC TGTTCAAGGT CCGCAACGTC AAGCCGCTGT GGTCGAAATT CGGCACCGTG
CTCGGCGTCA TCCTCGGCGG CTTCGACATG TGGTGCAACA CGCTCGGCTT CTCGCTGTTC
GGTACGCAGT CGCATGCCAA GCCGGATCGC GCGACGCTCG ATCCCGCCAA GGCGCACCAG
CCGAAGCCAG TGATGAAGCC GGACGGCAAG CTGACCTTCG ACCGGCTGTC GTCGGTATTC
CTGTCCAATA CGAATCACGA GGAAGACCAG CCGGTGCATC TGAAGGTCGC CGACATGGCG
CTGCAGAAGA GCTCCGAGCA CGACGTCTAT GCCGGCCCGT CCAACCGCTA TTGCCCGGCG
GGCGTCTATG AGTGGGTCGA GGACGGTGCC AGCCCGCGCT TCGTCATCAA CGCGCAGAAC
TGCGTCCACT GCAAGACCTG CGACGTCAAG GATCCCAATG GCAACATCAC CTGGGTTCCT
CCGGAAGGCG GCGGGGGGCC GAACTACGAA GCCATGTAG
|
|---|
| Protein sequence | MSTEELPERE SMEFDVVIVG AGPSGLTAAI RLKQLNADLT IVVVEKGSEV GAHILSGAVI
DPLALDKLIP DWRSDDDCPL KTPVKDDKFF WMTKSGAIKL PGFAMPPFMD NHHCYIGSLG
NVCRWLSRKA EALGVEIYPG FAATEVLYDE QGAVRGIATG DMGIAKDGKP KASFTRGMEL
LGKYTLFAEG ARGSLSKQLI AKFALDAKSE PPKFGIGLKE VWQIDPAKHQ KGLIQHSFGW
PLDMKTGGGS FLYHYDDNLV AVGFVVHLNY DDPYLSPFEE FQRFKTHPSI RGVFEGGKRL
AYGARAITEG GYQSVPRLSF AGGVLIGCAA GFVNVPRIKG VHNAMGSAML AAEHVNAALA
AGRANDELVD YENAWRSSPV GEDLFKVRNV KPLWSKFGTV LGVILGGFDM WCNTLGFSLF
GTQSHAKPDR ATLDPAKAHQ PKPVMKPDGK LTFDRLSSVF LSNTNHEEDQ PVHLKVADMA
LQKSSEHDVY AGPSNRYCPA GVYEWVEDGA SPRFVINAQN CVHCKTCDVK DPNGNITWVP
PEGGGGPNYE AM
|
|---|
| |