Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_2326 |
Symbol | |
ID | 5155535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 2408252 |
End bp | 2409829 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640557248 |
Product | putative quinoprotein |
Protein accession | YP_001238404 |
Protein GI | 148253819 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4993] Glucose dehydrogenase |
TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.55919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCACATCG GTAGGAAGAA GTCTCTGAGC TCGGGTGGGC TTGGCGTCGC CGCGCTGGCC GGGGTCGGTC TGCTGGTCCA GGCCACGCTG GTGCAGGCCG GGGCAGGCGT CGATTGGCCC GCCTACAACA ACGACTATAT GGGCCAGCGC TATCAGCGGC TGAAGCAGAT CAACACCAGG AACGTGGCCG AGCTGAAGGA GGTCTGCCGG GTCCAGCTGC AGGAGGGCGG ACCGTTCCAG ACTGGCCCGG TCGTGATCGA CGGCGTGATG TATGTGACCA CGGCGCGCCT GACCTTCGCG CTGGACGCGG CCACCTGCAA GGAAAAATGG CGGCACGCTT ACGAATCCGC GCGCGAGGAT GTCTGGCCGG TGAATCGCGG CGTCGCCGTC ATCAATGGCC GTGTCATTCG CGGCACCCCC GATGGTCATC TGCTGGCGCT CGATGCGCAG AGCGGTGCGC TGATCTGGCA GAACATGGTC GGCGATTCCC TGCTCGGCGA GTTCCTGTCG GGCGCGCCGA TCGGCTGGAA CGGCCTCGTT TTCACCGCCA CCGCGGGCTC CGACTGGGGC GTGCGCGGCC GCGTGCTGGC GTTCGACGTG CTGACCGGGC GCGAGGTCTG GCGCTTCGAC ACGATCCCGA CCGGCGACCA GCCGGGGGCC GAGACCTGGC AGAACAAGAA GTCGGCGCTG ACCGGCGGCG GCGGCTCCTG GTCGACGCTG TCGCTCGACA TCACCACCGG GGAATTGTTC GTGCCGGTCG GCAATCCCGC GCCGGACATG TTCCCGGACT ATCGTCCCGG CGACAATCTC TACACCGACT CCCTGGTCGT GCTCGACGCG CGCACCGGCG CGCTGAAATG GTATCACCAG GTCAAGGCCA ATGACGGCAT CGACCATGAT CTCGGTGCCG CGCCGACCTT GTTCCGCTCG CCTGATATCC AGGACATCGT CGTGTTCGGC GGCAAGGATG GTTTTGTCAC CGCGATCGAC CGCGCGACGC GCAAGCCGAT TTATCGCGTT CCGGTCACGA CCATCGACAA TGTCGCGGCG CGGCCGACGG ATGCTGGCGT GCATGTCTGC CCCGGCCTGC TCGGCGGCGT CGAATGGAAT GGCGGCAGCT ACGACCCGGT CAACGGCGCG ATCTATTTCG GCGCGGTCGA TTGGTGCGGC ACGTTCAAGA AGGGCGACGC CAAATATGTC GCCGGCGAGT TCTTCTTCGG CGGCGAGCCG ACGCTCGACC CGCCGGACCA GGCCGCCGGC TGGGTCACCA GCCTCAATGC CGTGAGCGGT GAGGTGAAGT GGAAATACAA GGCGGCCAAG CCGGTCGTCA GCGGCATCAC GTCGACATCG GGCGGCGTCG TGTTCGGTGG CGATACCGGC GGTAATTTCT TCGCGCTCGA CAGCCAGACC GGCAAGCCGC TCTACACGCT GGCGACCCAG GGCATGATCG CCGGCGGCGT CGTCACCTAC CAGGCCGGGG GCAAGCAATA TGTCGCACTG ACCTCCGGCA ACGTCTCGCG CATCACCTTC GGCGAGCTCG GCAATCCGAC GCTGATCGTT CTGGGGTTAC CGAATTGA
|
Protein sequence | MHIGRKKSLS SGGLGVAALA GVGLLVQATL VQAGAGVDWP AYNNDYMGQR YQRLKQINTR NVAELKEVCR VQLQEGGPFQ TGPVVIDGVM YVTTARLTFA LDAATCKEKW RHAYESARED VWPVNRGVAV INGRVIRGTP DGHLLALDAQ SGALIWQNMV GDSLLGEFLS GAPIGWNGLV FTATAGSDWG VRGRVLAFDV LTGREVWRFD TIPTGDQPGA ETWQNKKSAL TGGGGSWSTL SLDITTGELF VPVGNPAPDM FPDYRPGDNL YTDSLVVLDA RTGALKWYHQ VKANDGIDHD LGAAPTLFRS PDIQDIVVFG GKDGFVTAID RATRKPIYRV PVTTIDNVAA RPTDAGVHVC PGLLGGVEWN GGSYDPVNGA IYFGAVDWCG TFKKGDAKYV AGEFFFGGEP TLDPPDQAAG WVTSLNAVSG EVKWKYKAAK PVVSGITSTS GGVVFGGDTG GNFFALDSQT GKPLYTLATQ GMIAGGVVTY QAGGKQYVAL TSGNVSRITF GELGNPTLIV LGLPN
|
| |