Gene BBta_2326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2326 
Symbol 
ID5155535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2408252 
End bp2409829 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content66% 
IMG OID640557248 
Productputative quinoprotein 
Protein accessionYP_001238404 
Protein GI148253819 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4993] Glucose dehydrogenase 
TIGRFAM ID[TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.55919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACATCG GTAGGAAGAA GTCTCTGAGC TCGGGTGGGC TTGGCGTCGC CGCGCTGGCC 
GGGGTCGGTC TGCTGGTCCA GGCCACGCTG GTGCAGGCCG GGGCAGGCGT CGATTGGCCC
GCCTACAACA ACGACTATAT GGGCCAGCGC TATCAGCGGC TGAAGCAGAT CAACACCAGG
AACGTGGCCG AGCTGAAGGA GGTCTGCCGG GTCCAGCTGC AGGAGGGCGG ACCGTTCCAG
ACTGGCCCGG TCGTGATCGA CGGCGTGATG TATGTGACCA CGGCGCGCCT GACCTTCGCG
CTGGACGCGG CCACCTGCAA GGAAAAATGG CGGCACGCTT ACGAATCCGC GCGCGAGGAT
GTCTGGCCGG TGAATCGCGG CGTCGCCGTC ATCAATGGCC GTGTCATTCG CGGCACCCCC
GATGGTCATC TGCTGGCGCT CGATGCGCAG AGCGGTGCGC TGATCTGGCA GAACATGGTC
GGCGATTCCC TGCTCGGCGA GTTCCTGTCG GGCGCGCCGA TCGGCTGGAA CGGCCTCGTT
TTCACCGCCA CCGCGGGCTC CGACTGGGGC GTGCGCGGCC GCGTGCTGGC GTTCGACGTG
CTGACCGGGC GCGAGGTCTG GCGCTTCGAC ACGATCCCGA CCGGCGACCA GCCGGGGGCC
GAGACCTGGC AGAACAAGAA GTCGGCGCTG ACCGGCGGCG GCGGCTCCTG GTCGACGCTG
TCGCTCGACA TCACCACCGG GGAATTGTTC GTGCCGGTCG GCAATCCCGC GCCGGACATG
TTCCCGGACT ATCGTCCCGG CGACAATCTC TACACCGACT CCCTGGTCGT GCTCGACGCG
CGCACCGGCG CGCTGAAATG GTATCACCAG GTCAAGGCCA ATGACGGCAT CGACCATGAT
CTCGGTGCCG CGCCGACCTT GTTCCGCTCG CCTGATATCC AGGACATCGT CGTGTTCGGC
GGCAAGGATG GTTTTGTCAC CGCGATCGAC CGCGCGACGC GCAAGCCGAT TTATCGCGTT
CCGGTCACGA CCATCGACAA TGTCGCGGCG CGGCCGACGG ATGCTGGCGT GCATGTCTGC
CCCGGCCTGC TCGGCGGCGT CGAATGGAAT GGCGGCAGCT ACGACCCGGT CAACGGCGCG
ATCTATTTCG GCGCGGTCGA TTGGTGCGGC ACGTTCAAGA AGGGCGACGC CAAATATGTC
GCCGGCGAGT TCTTCTTCGG CGGCGAGCCG ACGCTCGACC CGCCGGACCA GGCCGCCGGC
TGGGTCACCA GCCTCAATGC CGTGAGCGGT GAGGTGAAGT GGAAATACAA GGCGGCCAAG
CCGGTCGTCA GCGGCATCAC GTCGACATCG GGCGGCGTCG TGTTCGGTGG CGATACCGGC
GGTAATTTCT TCGCGCTCGA CAGCCAGACC GGCAAGCCGC TCTACACGCT GGCGACCCAG
GGCATGATCG CCGGCGGCGT CGTCACCTAC CAGGCCGGGG GCAAGCAATA TGTCGCACTG
ACCTCCGGCA ACGTCTCGCG CATCACCTTC GGCGAGCTCG GCAATCCGAC GCTGATCGTT
CTGGGGTTAC CGAATTGA
 
Protein sequence
MHIGRKKSLS SGGLGVAALA GVGLLVQATL VQAGAGVDWP AYNNDYMGQR YQRLKQINTR 
NVAELKEVCR VQLQEGGPFQ TGPVVIDGVM YVTTARLTFA LDAATCKEKW RHAYESARED
VWPVNRGVAV INGRVIRGTP DGHLLALDAQ SGALIWQNMV GDSLLGEFLS GAPIGWNGLV
FTATAGSDWG VRGRVLAFDV LTGREVWRFD TIPTGDQPGA ETWQNKKSAL TGGGGSWSTL
SLDITTGELF VPVGNPAPDM FPDYRPGDNL YTDSLVVLDA RTGALKWYHQ VKANDGIDHD
LGAAPTLFRS PDIQDIVVFG GKDGFVTAID RATRKPIYRV PVTTIDNVAA RPTDAGVHVC
PGLLGGVEWN GGSYDPVNGA IYFGAVDWCG TFKKGDAKYV AGEFFFGGEP TLDPPDQAAG
WVTSLNAVSG EVKWKYKAAK PVVSGITSTS GGVVFGGDTG GNFFALDSQT GKPLYTLATQ
GMIAGGVVTY QAGGKQYVAL TSGNVSRITF GELGNPTLIV LGLPN