Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_2221 |
Symbol | glpD |
ID | 5150237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 2296377 |
End bp | 2297921 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640557150 |
Product | glycerol-3-phosphate dehydrogenase |
Protein accession | YP_001238306 |
Protein GI | 148253721 |
COG category | [C] Energy production and conversion |
COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0185895 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGAGCGGA TCTACGACCT CGCCATTGTC GGAGGCGGCG TGAATGGCTG CGGCATCGCG CGCGATGCGG CCGGACGCGG AAATTCCGTT TTTCTGTGTG AGATGAACGA TCTGGCGAGC GGAACCTCGT CCTGGTCAAC CAAGCTCGTG CATGGCGGCT TGCGCTATCT CGAATATTAC GAATTCCGCC TGGTGCGTGA GGCGCTGATC GAGCGCGAGA TTCTCTGGCA GATCGCGCCC CACATCATCC GCCCGCTGCG TTTCGTGCTG CCGCATCATT CCGGCCTGCG CCCGGCCTGG CTGCTGCGGC TCGGCCTGTT CCTCTACGAC CATCTCGGCG GCCGCAAACT GCTGCCGCCG ACACGCTCGG TGAATCTGCG CAGCGATGAG GTCGGCCGTC CGCTGATCGC CGGACGCTAT TCCACCGGTT TCGAATATTC CGACTGTTTT GTCGATGATG CGCGCCTCGT GGTGCTGACC GCGCGCGATG CCGCCGACCG CGGGGCCGTC ATCCGCACGC GCACGCGGGC GACCGCGATC CGGCAGGACG GCAGCAACTG GCTTGTCACC ACCGAGAACA CCCAGACCGG CGAGCGCGAG ACCATCAAGG CGCGTGCGCT GGTCAATGCC GCCGGCCCGT GGGTGGAGCA GGTGCTTTCG ACCGGCGCCG GTGTCAATGC AAAAGCGAAA GTGCGCCTGG TGCAGGGCTC GCATATCGTG GTGCGCAAGC TCTATGATCA CGACCGCGCC TACATCTTCC AGAATGCCGA CGGCCGCATC ATCTTCGCGA TTCCCTACCA ACAGGATTTC ACGCTGATCG GCACCACCGA TCGCGACTAT CAGGGCGATC CGGCCAAGGT GAAGGCGACC GACGAGGAAA TCGCCTATCT CTGCGCCGCG CTCGGCGAGT ACATCGCCAA GCCAGTGACG CCGGCTGACG TGGTGTGGAG CTATTCCGGC GTGCGCCCGC TGTATGACGA CGGCGCCAGC GAGGCCAAGG CGGCGACGCG CGACTACGTG TTCGAGCTCG ATACGCCCGG CGGCCTGCCG CTGCTCTCGA TCTATGGTGG CAAGATCACC ACCTACCGGC GACTGTCGGA GGAGGCGCTG GAGCGCCTGG CGCCGTATCT GAAGGGCGCG AAGGCGGACG AAGGCTGGAC CGGCAAGGCC GCGCTGCCCG GCGGCGACAT GCAGGTGCAG GCCGTTGCCA CGTTGGTCGC CGATCTCGGC AAGACCTATC CGTTCCTGTC GGATGCACAT GCGAAGCGCA TCGCGCATGC CTATGGTACG CGGGCCCAGA CCATGCTCGC GGGTGCGACA TCTTTGGCCG ATCTCGGCCA GGACTTCGGT GGCACCTTGA CGGAGCGCGA AGTCAGGTAC CTGATGACGA ATGAGTGGGC GTTGACGGCC GAGGACATTG TGTGGCGGCG ATCGAAGCTG GGGTTGCGAA TGTCGGCGGC TGAGATCGCA GCGCTCGATG CGTGGATCAC AGCCCACCGC GAGCGCGCTG CCGTGACGGC GCGTGAAGCC GGGGGACGCG CATGA
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Protein sequence | MERIYDLAIV GGGVNGCGIA RDAAGRGNSV FLCEMNDLAS GTSSWSTKLV HGGLRYLEYY EFRLVREALI EREILWQIAP HIIRPLRFVL PHHSGLRPAW LLRLGLFLYD HLGGRKLLPP TRSVNLRSDE VGRPLIAGRY STGFEYSDCF VDDARLVVLT ARDAADRGAV IRTRTRATAI RQDGSNWLVT TENTQTGERE TIKARALVNA AGPWVEQVLS TGAGVNAKAK VRLVQGSHIV VRKLYDHDRA YIFQNADGRI IFAIPYQQDF TLIGTTDRDY QGDPAKVKAT DEEIAYLCAA LGEYIAKPVT PADVVWSYSG VRPLYDDGAS EAKAATRDYV FELDTPGGLP LLSIYGGKIT TYRRLSEEAL ERLAPYLKGA KADEGWTGKA ALPGGDMQVQ AVATLVADLG KTYPFLSDAH AKRIAHAYGT RAQTMLAGAT SLADLGQDFG GTLTEREVRY LMTNEWALTA EDIVWRRSKL GLRMSAAEIA ALDAWITAHR ERAAVTAREA GGRA
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