Gene BBta_2220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2220 
SymbolglpR 
ID5150236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2295379 
End bp2296212 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content66% 
IMG OID640557149 
ProductDeoR family transcriptional regulator 
Protein accessionYP_001238305 
Protein GI148253720 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0244246 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTTC TCTCCCAGCG CCAGACTGAC ATTCTCAACA TCGCGCGCGC CTCCGGTCGC 
GTCATGGTGG AAGATCTGGC GCGCCGTTTC GAAGTCTCGG CGCAGACGAT TCGCAAGGAT
CTCAACGATC TCTGCGAGCA GCGCGCGCTG ACGCGCATTC ACGGCGGTGC CATTATCGCG
TCGGGGGTGG AGAACCTCGC TTATGAAGCG CGGCGCTTCG TCGCGGCGGA CGAGAAGAAG
GCGATCGGGA CGGTTGCCGC TGCGCGCATT CCCAACGGCT CGTCGCTCTT CATCAACATC
GGCACCACCA CCGAGGAGGT GGCGAGCGCG CTGTCTTCGC ATCAGGATCT GCTGGTCATC
ACCAACAATC TGAATGTCGC GATGCTGCTC TATCCGCATC CGCGCATCGA GGTGATCGTG
GCCGGCGGCA CGGTGCGGCG TTCGGATGGC GGCGTGGTCG GCTCGACGGC GACGCAACTG
ATCGGCCAGT TCAAGGTGGA CTACGCGATC ATCGGCGCCT CGGCGATCGA TGAGGAGGGC
GCGCTGCTCG ACTTCGACTA TCGCGAGGTG CAGGTGGCGC AGGCCATCAT CGCCAATGCG
CGCAGCGTGA TGCTGGTGGC GGATTCCACC AAACTGCATC GCAGTGCCCC GGTGCGCATC
GCCCATCTCA GCCAGATCCA GACCTTCGTC ACCGACCGTC CGTTGCCCGA TGGGCTCGCC
AGCCTCTGCC ACAGCCGCGG CATCGAGGTG GTCTCGGCGA TGCCGGCCGA CGAGGCGGAG
GAGGCCGCAG AGGCGGCCGA AACAGCCAAC CCGGCGGCAC TCCGCCGCGC CTGA
 
Protein sequence
MAVLSQRQTD ILNIARASGR VMVEDLARRF EVSAQTIRKD LNDLCEQRAL TRIHGGAIIA 
SGVENLAYEA RRFVAADEKK AIGTVAAARI PNGSSLFINI GTTTEEVASA LSSHQDLLVI
TNNLNVAMLL YPHPRIEVIV AGGTVRRSDG GVVGSTATQL IGQFKVDYAI IGASAIDEEG
ALLDFDYREV QVAQAIIANA RSVMLVADST KLHRSAPVRI AHLSQIQTFV TDRPLPDGLA
SLCHSRGIEV VSAMPADEAE EAAEAAETAN PAALRRA