| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2215 |
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| Symbol | |
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| ID | 5156322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 2289540 |
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| End bp | 2292680 |
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| Gene Length | 3141 bp |
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| Protein Length | 1046 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640557144 |
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| Product | RND efflux transporter |
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| Protein accession | YP_001238300 |
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| Protein GI | 148253715 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.12162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.156003 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGTT TCAACCTGTC GGCCTGGGCG GTCAGTCATC CGCCACTGGT GCTGTTCCTG
ATCGTGGCGC TCGGCCTGTT CGGGTTCATC TCCTATGAGC GTCTCGGGCG CGCCGAGGAT
CCGTCCTTTA CCGTCAAGGT CGTCAACGTC TCGATGATTT GGCCCGGCGC CACCGCGACG
GAAATGCAGA GCCAGGTCGC GGACCCCATC GAGAAGAAGC TGCAGGAGCT GCCTTACTTC
GAGAAGGTGG AGACCTATTC CAAGCCCGCC TTCGCCGCGA TGCAGATCAC CTTCCGCGAC
TCGACGCCGC CGAAGGAGGT GCCTTACCTG TTCTACCTCG TCCGTAGGAA GCTCGCGGAT
GTGCAGGCCT CGCTGCCTTC GGGGGTGCTC GGGCCGTTCG TCAATGACGA GTTTTCCGAC
GTCGATTCCA TCCTGTTCAT GATGACCGGC GACGGGGCGG ACTATGCTCA GCTGAAGAAG
GTCGCGGAAG GCCTGCGCCA GCGCCTGTTG AAGGTCGACG GCGTCACCAA GGTCAATCTC
TACGGCACCC AGGACGAGCG CATCTATGTC GAGTTCAGCC ATGCCAAGCT GGCAACGCTC
GGGATCACGC CGCAGGCGCT GTTCGATTCC CTCGCCAAGC AGAACAATGT GACACCGGCC
GGCACGGTCG AGACCTCGTC GCAGCGCGTG CCGCTGCGCG TCACCGGCGC GCTCGACGGC
GCCAAGGCGG TGGCCGAGAC GCCGGTCGAG AGCAACGGCC GCGTGTTCCG GCTCGGCGAC
ATCGCCACCG TCACCCACGG CTTCGTCGAT CCGCCGACCT ACAAGGTGCA TCAGGAGGGC
AAGCCGGCGC TCGGCCTCGG TATCGTCACC GCCAAGGGCG CCAACATCCT CGAGCTTGGC
AAGGACGTGC ACGCCGCGTC CGACGATTTC ATGAAAGCGG TGCCGCAGGG TATCGAGCTG
AAGCAGATCG CTGACCAGCC GAAAGTGGTC GAGACCGCGG TCGGCGAATT CGTGCACTCC
TTCGTCGAGG CGCTGGTCAT CGTGCTGTTC GTTTCGTTCC TGGCGCTCGG CTGGCGCACC
GGCATCGTGG TGGCGCTGTC GGTGCCGCTG GTGCTCGGCA TCGTCTTCAT CGTGATGAGT
GCAATGGGAC TGGATCTGCA CCGCATCTCT CTCGGCGCGC TGATCATCGC CCTCGGCCTC
CTGGTGGACG ACGCGATCAT CGCGGTCGAG ATGATGGTGG TGAAGATGGA GCAGGGCTGG
GACCGCGTCC GCGCCGCATC GTTCGCCTGG GAATCCACGG CCTTCCCGAT GCTCACGGGA
ACGCTGGTCA CCGCCGCCGG ATTCCTGCCG ATCGGCTTCG CCAGTTCTGC GGTCGGCGAA
TACACGGGAA CCATCTTCTG GATCGTCGCC ATCTCGCTGG TGGCGTCCTG GTTTGTCGCT
GTCATCTTCA CACCCTATAT CGGCGTGAAG CTGTTGCCGG ACATGAAGGC CCATCACGGT
CACGATGAGA ATGCGGTCTA TGATACCCGG ATGTATCGCG GTCTGCGCGC CGTCGTGAGC
TGGTGTGTCG CGCATCGCAT CACCACCGTG GCCGCGACGG TCGGCGTGTT CGTGGCCTCG
ATCGTCGCCT TCGGCCACGT CCAGCAGCAG TTCTTCCCGC TGTCGGAGCG GCCCGAGCTG
TTCCTGCAGT TGCGGCTGCC GGAGGGCACC GCCTTCAACG TCACCGAGAA GGCCGCGCGC
AAGGCCGAGG GGTTCTTGAA GGACGATAAG GACATCGAGA CCTTCACCTC CTATGTCGGC
CAGGGCTCGC CGCGCTTCTG GCTTGGCCTC AATCCGCAAC TGCCGAACGA GGCTTTTGCC
GAGATCGTGA TCGTCGCCAA GGACGTCGCG GCGCGCGAGC GGATCAAGGC CAGAATCGAG
GCCGCCGCTG CCAATGGCGA GATCAACGAG GCGAGGGTGC GCGTCGATCG CTTCAATTTC
GGTCCGCCCG TCGGCTTCCC CGTGCAGTTC CGGGTGATCG GCCCTGACAC CGCCAAGGTT
CGCGAGATCG CCTATCAGGT GCGCGATGTC ATGCGCCAGA ATGCCAATGT GCGGGACCCG
CAGTTCGACT GGAACGAGCA GTCGCCCTAT TTGAAGCTGG TCGTCGACCA GGATCGCGCC
CGCGCGATCG GCCTGACGCC GCAGGACGTG TCGCAGTCGC TGGCGATGCT GATCTCAGGC
GTGCAGGTGA CTACCATCCG TGACGGCATC GAGAAGGTCG GCGTAATCGC ACGGGCCGTG
CCGTCCGAAC GGCTCGATCT CGCGGGCGTC GGCGACCTCA CCATCACCTC GCGCAACGGC
GTCGCCGTGC CGCTGCAGCA GATCGCCAAG ATCGAATATT CGCATGAGGA GCCGATCCTG
CGGCGGCGCA ACCGCGACAT GGCGATCACG GTGCGGTCCG ACGTCGCCGA CGGCGTGCAG
GCGCCCGACG TCACCAACCA GATCTGGCCG AAGCTCGCCG ACATTCGTAG TCACCTCGAT
CCGGCCTACC GCATCGAGAT GGGCGGCGCG ATCGAGGAGT CGGCCAAGGG CAATGCGTCG
ATCTTCGTGC TGTTTCCGCT GATGGTCATC GTCATGCTGA CCCTGCTGAT GATCCAGCTG
CAGAGCTTTT CGCGCCTGGT GCTGGTGTTC CTGACGGCAC CGCTCGGCAT CATCGGCGCA
TCGTTTGGGC TCAACGTCGC CAATGCGCCG TTCGGTTTCG TGGCGCTGCT CGGGCTGATC
GCGCTGGCCG GCATGATCAT GCGCAACACC GTGATCCTGG TCGACCAGAT CGAAACCGAC
GTGGCCTCGG GCCTGACCCG GCGCGAGGCG ATCATCGAGG CCACGGTGCG GCGTGCGCGT
CCGGTGGTGC TGACCGCGCT GGCCGCGATC CTTGCGATGA TCCCGCTGTC GCGTTCCGCG
TTTTGGGGGC CGATGGCGAT CACCATCATG GGCGGCTTGT TTGTTGCAAC CTTCCTCACG
CTGCTGTACT TGCCAGGCCT CTATGCCCTA TGGTTCCGGA AGAGCCTCGA TGAGCGCGGG
GCGGGGGCGC GGGATCATTC TGCGGCGCAG CACGTTGATG AACCGGCACC GGAGCTTCCT
ATCGCCCAGG CGGCTGAGTA A
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| Protein sequence | MKRFNLSAWA VSHPPLVLFL IVALGLFGFI SYERLGRAED PSFTVKVVNV SMIWPGATAT
EMQSQVADPI EKKLQELPYF EKVETYSKPA FAAMQITFRD STPPKEVPYL FYLVRRKLAD
VQASLPSGVL GPFVNDEFSD VDSILFMMTG DGADYAQLKK VAEGLRQRLL KVDGVTKVNL
YGTQDERIYV EFSHAKLATL GITPQALFDS LAKQNNVTPA GTVETSSQRV PLRVTGALDG
AKAVAETPVE SNGRVFRLGD IATVTHGFVD PPTYKVHQEG KPALGLGIVT AKGANILELG
KDVHAASDDF MKAVPQGIEL KQIADQPKVV ETAVGEFVHS FVEALVIVLF VSFLALGWRT
GIVVALSVPL VLGIVFIVMS AMGLDLHRIS LGALIIALGL LVDDAIIAVE MMVVKMEQGW
DRVRAASFAW ESTAFPMLTG TLVTAAGFLP IGFASSAVGE YTGTIFWIVA ISLVASWFVA
VIFTPYIGVK LLPDMKAHHG HDENAVYDTR MYRGLRAVVS WCVAHRITTV AATVGVFVAS
IVAFGHVQQQ FFPLSERPEL FLQLRLPEGT AFNVTEKAAR KAEGFLKDDK DIETFTSYVG
QGSPRFWLGL NPQLPNEAFA EIVIVAKDVA ARERIKARIE AAAANGEINE ARVRVDRFNF
GPPVGFPVQF RVIGPDTAKV REIAYQVRDV MRQNANVRDP QFDWNEQSPY LKLVVDQDRA
RAIGLTPQDV SQSLAMLISG VQVTTIRDGI EKVGVIARAV PSERLDLAGV GDLTITSRNG
VAVPLQQIAK IEYSHEEPIL RRRNRDMAIT VRSDVADGVQ APDVTNQIWP KLADIRSHLD
PAYRIEMGGA IEESAKGNAS IFVLFPLMVI VMLTLLMIQL QSFSRLVLVF LTAPLGIIGA
SFGLNVANAP FGFVALLGLI ALAGMIMRNT VILVDQIETD VASGLTRREA IIEATVRRAR
PVVLTALAAI LAMIPLSRSA FWGPMAITIM GGLFVATFLT LLYLPGLYAL WFRKSLDERG
AGARDHSAAQ HVDEPAPELP IAQAAE
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