| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2159 |
|---|
| Symbol | |
|---|
| ID | 5153866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 2237655 |
|---|
| End bp | 2238245 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640557094 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001238250 |
|---|
| Protein GI | 148253665 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5553] Predicted metal-dependent enzyme of the double-stranded beta helix superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.244968 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATA TCGCGCGCTT CCGCGACTTC GTCGCCGCTA CCGCACGCCT GATTGCGGGC
ACCACAGACG AGACAACGCT GCTCACCGCC CTCGCGCCCA AGCTTGCTGA ACTGGTCGGA
TATGACGACT GGCTGCCCGA GGCCTATGCC GTGGCGGGTG GGGAGAAGTA CCGCCAATAT
CTGCTCTACG CCGATCCGCT GGAGCGGTTC TCGATCGTCA GCTTCGTCTG GGGTCCGGGC
CAGGGCACGC CGGTGCACGA TCATCGCGTC TGGGGCCTGG TCGGCGTGCT CAGGGGCGAG
GAGCTCTCGG TGAGCTATGA ACGGCGGCCG GACGGAACGT TGCGCGCCGG CCAGCCGGAA
CGGTTGCGGG CTGGACAAAC CGCCGCGGTA TCGCCACAGA TTGGCGACAT CCACGCCATC
TCCAACGGTC TGGCGGACCG CTCCTCGATC AGCATCCACG TCTATGGCGG CAATATCGGC
CGCATCCGCC GCGCGGTGTT CGACGCGGAG ACCGGCACCG CCAAGGACTT CATCTCCGGA
TATTCGAATG ACACCGTCCC CAACCTCTGG CCCGACCGCA ACACCGCCTG A
|
|---|
| Protein sequence | MTDIARFRDF VAATARLIAG TTDETTLLTA LAPKLAELVG YDDWLPEAYA VAGGEKYRQY
LLYADPLERF SIVSFVWGPG QGTPVHDHRV WGLVGVLRGE ELSVSYERRP DGTLRAGQPE
RLRAGQTAAV SPQIGDIHAI SNGLADRSSI SIHVYGGNIG RIRRAVFDAE TGTAKDFISG
YSNDTVPNLW PDRNTA
|
|---|
| |