| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2147 |
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| Symbol | cheD |
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| ID | 5155397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 2226199 |
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| End bp | 2226840 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640557083 |
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| Product | CheD, stimulates methylation of MCP proteins |
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| Protein accession | YP_001238239 |
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| Protein GI | 148253654 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAGGG CGAAGAGCAG GCGGCGTCAA ACGACGGATG CCTCGGTCTC CGACGACCTT
CTGACATGTC CTCGGAAGTA TCGCGACGAG CGCTTTGACG CGATCGCGGT CAAGCTCTTT
CCGGGAGAGC ACTATGTCAC CGACGCCGTG GACGAGATGC TCGTTACCGT GCTCGGGTCC
TGTGTTGCAG CCTGCATCCG TGATCCGCAA ACCCGGGTCG GCGGCATGAA CCATTTCATG
CTGCCGGAGA GCTTTGGCGA TTGGGGCGAC GTGTCCGACG GGATGCGCTA TGGCAATGTC
GCGATGGAGC GGCTGATCAA CGACATTCTC GCCCGGGGCG GCGCCCGACG CCGCCTGGAG
ATCAAGGTGT TCGGCGGCGC CAATGTGCTG AATGGCATGG CGAAGATCGG GCATCGCAAC
GCCGACTTCG TCGAAGACTA TCTGGCGGCG GAACACCTTC CCATCGCAGC GTATCACCTG
CGCGGCTCGC TGCCGCGCCG TGTTCACTAC TTCCCGGTAA CCGGCCGCGT GATGCTGCTC
GAATTGCCGC GCGCCGATCA TGATGCCCTT GTCCGCAACG AGACGTCCTA CAAGACACGA
ATCCAGGTCG AACCCGTTGC CGGATCGGTC GAGATTTTTT GA
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| Protein sequence | MIRAKSRRRQ TTDASVSDDL LTCPRKYRDE RFDAIAVKLF PGEHYVTDAV DEMLVTVLGS
CVAACIRDPQ TRVGGMNHFM LPESFGDWGD VSDGMRYGNV AMERLINDIL ARGGARRRLE
IKVFGGANVL NGMAKIGHRN ADFVEDYLAA EHLPIAAYHL RGSLPRRVHY FPVTGRVMLL
ELPRADHDAL VRNETSYKTR IQVEPVAGSV EIF
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