| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2144 |
|---|
| Symbol | cheW |
|---|
| ID | 5155394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 2222403 |
|---|
| End bp | 2222930 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640557080 |
|---|
| Product | chemotaxis protein cheW |
|---|
| Protein accession | YP_001238236 |
|---|
| Protein GI | 148253651 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0835] Chemotaxis signal transduction protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.929583 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCCTG ACAACAAGCC GATCGCTCCG TTTGGCCAAG AAGCGGCGGT CAGCGAGAAC
GCGCAGCAGT TCATCACCTT CACGCTGGGC GCGGAGGAGT ACGGCATCGA CATCATGGTG
GTCCGGGAGA TCAAGGGCTG GACCGAAACG ACCATGATCC CGAACGCTCC GCCCCATGTC
CGGGGTGTCA TCAATCTGCG CGGCATCATC GTTCCCATCT TCGACCTGCG CGCCCGGTTC
GGCACCGGCG TGACCGTGCC GACCAATATG CATGTGGTGA TCATCGTCGC CGCCGGCACG
CGCACGGTCG GCCTGCTGGT CGATACCGTC TCGGACATCA TCTCCGTCGA TCCGAAAGAC
ATCCGCGACG TGCCGGACAT GGGCATGCCG ACCGAGGATC AGTTCCTGGA GGGGCTGGTC
GCGATCCAGA ACAGGATGGT GACGCTGGTG TCGTTGTCGG GTCTGTTCGG GATGCCGGCT
TCGTCAGTGA CGCGTACGTC TGCCGCAGCC GCCGCGGCGG CCGCCTAA
|
|---|
| Protein sequence | MQPDNKPIAP FGQEAAVSEN AQQFITFTLG AEEYGIDIMV VREIKGWTET TMIPNAPPHV
RGVINLRGII VPIFDLRARF GTGVTVPTNM HVVIIVAAGT RTVGLLVDTV SDIISVDPKD
IRDVPDMGMP TEDQFLEGLV AIQNRMVTLV SLSGLFGMPA SSVTRTSAAA AAAAA
|
|---|
| |