| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2127 |
|---|
| Symbol | ytfQ |
|---|
| ID | 5154601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 2204189 |
|---|
| End bp | 2205112 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640557064 |
|---|
| Product | ABC transporter periplasmic-binding protein ytfQ precursor |
|---|
| Protein accession | YP_001238220 |
|---|
| Protein GI | 148253635 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTTGCTTG CCACCTCCGC CAGCGCCGCC GAATTGACCG TCGGCTTTTC GCAGATCGGA
TCCGAGTCCG GCTGGCGCGC GGCCGAGACC TCGGTCTCGA AGTCGGAAGC GGCCAAGCGC
AAGATCAACC TGAAGATTGC TGACGCCCAG CAGAAGCAGG AAAACCAGAT CAAGGCGATC
CGATCCTTCA TCGCCCAGAA CGTCGACGCG ATCTTCCTCG CGCCGGTCGT GGCCTCGGGC
TGGGATGCCG TGCTGAAGGA AGCCAAGGAA GCCAAGATCC CGGTCGTGCT GCTCGACCGC
GACATCGATC CCTCGGGCAA GGACCTCTAT CTGACCGCCG TCACCTCCGA CAGCGTGCAT
GAGGGCGAAG TGGCCGGCGA ATGGCTCGCC AAGACCGTCG GCGGCAAGGC CTGCAACGTG
GTCGAACTGC AGGGCACGGT CGGCGCCAGC GTCGCCACCA ACCGCAAGAA GGGTTTTGAC
GCCGTCATTG CCAAGAACGC CAACCTGAAG GTCGTGCGCA GCCAGACCGG CGACTTCACC
CGTGCCAAGG GCAAGGAGGT GATGGAAAGC TTCATCAAGG CCGAGAACGG CGGCAAGTCG
ATCTGCGCGG TCTATGCCCA TAATGACGAC ATGATGGTCG GTGCGATCCA GGCGATGAAG
GAAGCCGGCC TCAAGCCCGG CAAGGACATC CTGACCGTCT CGATCGATGC CGTGCCGGAT
ATCTTCAAGG CGATCTCAGC CGGCGAAGCC AACGCCACCG TCGAGCTCAC GCCGAACATG
GCGGGCCCGG CTTTCGACGC TATCGTCGCC TTCAAGGAGA AGGGCACCGT GCCGCCGAAA
TGGATCCAGA CCGAGTCGAA GCTCTACACC GCTGCTGACG ATCCGCAGAA GGTCTACGAC
AGCAAGAAGG GGCTCGGCTA CTGA
|
|---|
| Protein sequence | MLLATSASAA ELTVGFSQIG SESGWRAAET SVSKSEAAKR KINLKIADAQ QKQENQIKAI
RSFIAQNVDA IFLAPVVASG WDAVLKEAKE AKIPVVLLDR DIDPSGKDLY LTAVTSDSVH
EGEVAGEWLA KTVGGKACNV VELQGTVGAS VATNRKKGFD AVIAKNANLK VVRSQTGDFT
RAKGKEVMES FIKAENGGKS ICAVYAHNDD MMVGAIQAMK EAGLKPGKDI LTVSIDAVPD
IFKAISAGEA NATVELTPNM AGPAFDAIVA FKEKGTVPPK WIQTESKLYT AADDPQKVYD
SKKGLGY
|
|---|
| |