| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2120 |
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| Symbol | |
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| ID | 5154389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 2196334 |
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| End bp | 2197350 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640557057 |
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| Product | putative TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| Protein accession | YP_001238213 |
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| Protein GI | 148253628 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCAG CCACATCCAT GTCCCGTCGC CGCTTCGTCG GCTCCGCGCT CGCAGGGGCC
TCGGCTCTGG CGTTCGGGTC CGCGCAGGCG CAATCGGCCA AATATCGCCT GCGCTACGGC
ACGGCGTTTC CCGCCACCCA TCCCGGCGTC ATCAGAATCA TCGAGGCGTC CGAGCTGATC
AAGAAGCAGA CAAACGGCCT GGTCGATCTG CAGGTCTATC CGAACAGCCA GCTCGGCAGC
GAGCCCGACA TGTTCTCGCA AGTCCGCTCT GGCGCGCTCG ACTTCATGTC GACGTCAGGC
GTGAACCAGA CGGTGGTGCC GATCGGCGGC ATCAATGCGG TCGCCTTCGC GTTCGAGAGC
TACGACCAGG TGTGGTCGGC GATGGATGGC GATCTCGGCA ACCATGTGCG TGGCGAGTTT
GCCAAGGTCG GCCTGCACGT GCTGCCGAAA TGCCTCGACA ACGGCTACCG CAACATCACC
TCCGGCGCCA AGCCGATCAC GTCGCCGGAC GACCTTAAGG GCTTCAAGAT CCGCGTGCCC
GGCAATCCGC TGTGGGTGAC CTTGTTCAAG ACGCTGGGCG CCGCACCGAC GCCGATCAAT
TTCGGCGAGC TCTATGCCGC CTTGCAGACC CGCATCGTCG ACGGCCAGGA GAATCCGCTG
GCGCTGATCC AGAGCGCCAA GCTCTACGAG GTGCAGAAGT TCATCGCGCT GTCCGGCCAC
ATCTGGGACG GCCATCACAT CTTCGCCAAT GCCACGCGCT GGAGCGGTTT GCCGGCCGAC
GTGCGCGACG CCATCACCGC GGCGCTGTCG GATGCGGCGG TGAAGGAGCG GCAGGACATC
CAGAGCTTCA ACGAGAAGGC GCAGGCCGAG ATGCAGGCCG CCGGCATCGC CTTCAACAAG
GTCGATACCA AGCCGTTCCG CGACGCGCTG CGCACCGCCG GCTTCTATTC CGAGTGGAAG
ACCAAGTTCG GTGCCGAGGC CTGGAGCCTG CTCGAGAAGT CGGTCGGCCA GCTCTGA
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| Protein sequence | MSSATSMSRR RFVGSALAGA SALAFGSAQA QSAKYRLRYG TAFPATHPGV IRIIEASELI
KKQTNGLVDL QVYPNSQLGS EPDMFSQVRS GALDFMSTSG VNQTVVPIGG INAVAFAFES
YDQVWSAMDG DLGNHVRGEF AKVGLHVLPK CLDNGYRNIT SGAKPITSPD DLKGFKIRVP
GNPLWVTLFK TLGAAPTPIN FGELYAALQT RIVDGQENPL ALIQSAKLYE VQKFIALSGH
IWDGHHIFAN ATRWSGLPAD VRDAITAALS DAAVKERQDI QSFNEKAQAE MQAAGIAFNK
VDTKPFRDAL RTAGFYSEWK TKFGAEAWSL LEKSVGQL
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