| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2114 |
|---|
| Symbol | |
|---|
| ID | 5154741 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 2188519 |
|---|
| End bp | 2189550 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640557051 |
|---|
| Product | oligopeptide ABC transporter membrane protein |
|---|
| Protein accession | YP_001238207 |
|---|
| Protein GI | 148253622 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCACGA TCGGCGCAAC TTTGCTGCGG GCGGGACGAC GCTTCGTCTC GTCGCTGCCG
GCGCTGTTCG GTGTCCTGGT CTTCACCTTC CTCTTGATGC GCGTACTGCC GGGCGATCCG
GCCGTGTTCT TCGCCTCCGG CCCGAATGCC GGCAAGGAGG AGATCGAGGT GATCCGCCGG
CAGCTCGGGC TCGACAAGCC GCTGCCGAAC CAGCTCGCGA TCTATCTCTA CGACGTCGGC
CGCGGCAATC TCGGCCGCTC GATGATGACT GGGCAGGCGG TCGCCAAGGA CCTCAAGGAG
CGGCTGCCGG CCTCGCTCGA GCTGACATTG ACAGCGTTGC TGATTGCGCT GGTCACCGCG
GTGCCGCTCG GCGTGCTCGC GGCGTTGCGG CCGGGATCGC TGGTCGATCA CGGCGTGCGG
CTGTTCTGCT CGCTCGGCGT CTGCGTGCCG ACCTTCGTCT CCGGCCTGCT GCTGATCTAC
GTGTTCTATT ATCTGCTCGG TTTCGCGCCG GATCCGACCG GGCGTATCGA CATCTTCGCC
ACTCTGCCGC CATCGCGCAC TGGCTTCCTG ATCATCGACT TCCTTCTCGC GGGCGATCTC
GACGGCTGGT GGGCGGCGGC GCGGCAGCTG ATGCTGCCAG CGCTGACCAT GGCGCTGTTC
GTGATCGCGC CGCTGGCGCG CATCACCCGG GCCTCGATGC TGGTCTCGCT CGGCAGTGAT
TTCGTCCGCA CCGCGCGCTC GGTCGGGCTG TCCTGGTGGC GGATCGTCGT CACCTATGCG
CTGCGCAACG CGATCCTGCC TGTCATCACC ATTGCCGGCA TCGTGTTCTC GACCATGCTC
GGCGCCAATG TCCTGGTGGA GAAGGTGTTC TCCTGGCCAG GCGTCGCCTC CTACGCGCTC
GATGCGCTGC TGGTGTCGGA CTATGCGCCG GTGCAGGGTT TCGTGCTGCT GATGGCGACC
ATCTTCGTGA TCGTCAATCT CCTGGTCGAT GTGCTCTACG GTATCGCCGA TCCCCGGGCG
ACGGTGGCAT GA
|
|---|
| Protein sequence | MGTIGATLLR AGRRFVSSLP ALFGVLVFTF LLMRVLPGDP AVFFASGPNA GKEEIEVIRR
QLGLDKPLPN QLAIYLYDVG RGNLGRSMMT GQAVAKDLKE RLPASLELTL TALLIALVTA
VPLGVLAALR PGSLVDHGVR LFCSLGVCVP TFVSGLLLIY VFYYLLGFAP DPTGRIDIFA
TLPPSRTGFL IIDFLLAGDL DGWWAAARQL MLPALTMALF VIAPLARITR ASMLVSLGSD
FVRTARSVGL SWWRIVVTYA LRNAILPVIT IAGIVFSTML GANVLVEKVF SWPGVASYAL
DALLVSDYAP VQGFVLLMAT IFVIVNLLVD VLYGIADPRA TVA
|
|---|
| |