| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2096 |
|---|
| Symbol | |
|---|
| ID | 5154325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 2167975 |
|---|
| End bp | 2168796 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640557033 |
|---|
| Product | ABC transporter substrate-binding protein |
|---|
| Protein accession | YP_001238189 |
|---|
| Protein GI | 148253604 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACGTT CGTTGTTCAT CAGTTTCGCC GCCCTCGCGT CGCTCGCCTC CGCCGGCGCC
GCCGAGCTGC CCGCCGAGAT CAAGCAGTCG GGCACGCTCA AGCTCACGGT CAACTCGACC
TACGCGCCGA TGGAATATCA CGACCCCGCC ACCAACGAGC TCAAGGGGCT GGACATTGAT
CTCGCCAACG AGCTGGCGAA GCGCCTTGGC GTGAAGATCG CGTGGAGCGA GACGCCGTTC
GCCGAGCTCA TCCCCTCGCT GCAGACGAAG CGCGCCGACT TCATCATTTC CGGAATTTCA
GACCGCGCCT CGCGGCGCGA GACCGCCGAT TTCGTCGACT ATCTCGTCAC CGGTCCGCAA
TTCTTCGTGC TGGCCGAAAG CGATGCCAAG GTCGTCATCG ACCTCTGCGG CCGCAAGATC
GGCACTACGC GCTCGACCAG CTTCCCCGCC GAGATCGAGA AGTGGAGCAA GGCGACTTGC
GAGGCCTCAG GCAAACCGGC TGCGCAATAC GTTCCCGGCG AGAACTCGAT CGACGTGCGC
AACCAGCTCA AGCAGGGTCG CATCGACGCG GCCGTGCAGG GCAGCGAGAC CTTGCCCTAT
GCGCAGTCGC AGGAGGCCGG CAAGTACCGC ATCGTCGGCG AGCCCATCGC CTTCGGCTAT
CAGGGCATCA TGTTTCGCAA GGATAATGCC GGCTTTCGCG ACCTGATCAC CGACCAGCTC
AAGGCGATGA TCGCCGACGG CAGCTACAAG GCCATTCTCG AAAAATGGGG CCTCGGAGCC
AATGCGGTGC GCGAGCCCAT GCTCAACGCG GCGCCGCAAT GA
|
|---|
| Protein sequence | MRRSLFISFA ALASLASAGA AELPAEIKQS GTLKLTVNST YAPMEYHDPA TNELKGLDID
LANELAKRLG VKIAWSETPF AELIPSLQTK RADFIISGIS DRASRRETAD FVDYLVTGPQ
FFVLAESDAK VVIDLCGRKI GTTRSTSFPA EIEKWSKATC EASGKPAAQY VPGENSIDVR
NQLKQGRIDA AVQGSETLPY AQSQEAGKYR IVGEPIAFGY QGIMFRKDNA GFRDLITDQL
KAMIADGSYK AILEKWGLGA NAVREPMLNA APQ
|
|---|
| |