| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2060 |
|---|
| Symbol | |
|---|
| ID | 5153165 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 2131543 |
|---|
| End bp | 2133111 |
|---|
| Gene Length | 1569 bp |
|---|
| Protein Length | 522 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640556997 |
|---|
| Product | putative ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_001238153 |
|---|
| Protein GI | 148253568 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.31936 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGATC CCGCGCTGGC TCACCCAGCC CCCGTACAGC CGCTCCTGCA GACGGTCGGA
TTGACCAAGC GCTACGGCGA TTTCCTCGCC AATGACAGGA TCGACATCGA GATCGTCCCG
CGCGAAATCC ACGCTCTCCT CGGCGAGAAC GGCGCGGGCA AGTCGACATT GGTCAAGACC
ATCTACGGAC TGGTGCAGCC GAGTGGCGGG GAATTGCGTT GGCAGGGCCG ACCGATCAAG
CTCTCCGGGC CCTCCGAGGC CCGATCGCTA GGCATCGGTA TGGTGTTTCA GCATTTCTCC
CTGTTCGACA ATCTGACCGT CGCCGAGAAC GTAGCGCTCG GGCTAGATGG CAAGGAGCCG
CTCAGGGCGG TGTCGGCCCG GCTGGCCGAC GTCGCCCGCG ACTACGGACT GCCGCTCGAT
CCCAAGCGGG AGGTCTGGCA ACTCTCCGTG GGCGAGCGGC AGCGCATCGA GATCGTACGG
GCCTTGATGC AGAACCCGAA ATTCCTGATC CTGGACGAGC CCACGGCGGT GCTGACGCCG
CAGGAGGCCG ATCAGCTCTT CATCGTGCTT GAGCGGCTGA AGCAAGAGGG GCGCGCGATC
CTCTATATCA GCCATAAGCT GGATGAGGTG AAGCGGCTGT GCGACACCGC CACGATCCTG
CGCGGCGGCA GGAAGGTTGC TACCTGCAAT CCGAAGCTCG AGACGGCCGG ATCGCTTGCC
CGTATGATGG TGGGGAGCGA GATCAAGGAA GTGAAGCCGT CGGCCGAGCG GCGCACGACG
GTGCCGCGCC TGGTCGTGAA TGATCTCACG CTGCAACCGG CCGAGTTGCA TGGGGTCCGT
CTGCAGAATA TCTCGTTCGA GTTGAAGGGC GGTGAGATCC TCGGCATCGC CGGGGTCGCA
GGCAATGGAC AGGACGAACT GTTCGCCGCG CTTTCCGGGG AGCGCCTTGT CAAGGAGCCG
GGAACGATCA TCATCGACGG CATCGCCTGC GGCAATCTCT CGATCAGCGA GCGCCGCAAG
ATGGGCGCGG CTTTCGTGCC CGAGGAACGG CTCGGTCACG GCACCGCGCC GCGGATGAGG
CTGTCGGAGA ATGCGCTGCT GACGGGGCAC GCCGCCGGCG ACATGGTGCG CCACGGCTTC
ATCAATGCCG CCGCCACGCT GCGGACGGTG GATCGCACCA CCGAGACGTT CGACGTCCGC
AAGGCCAAGC GCGATCCCGA GGCCGCCAGC CTGTCCGGCG GCAATCTCCA GAAATTCGTC
GTCGGCCGCG AGATCTTGCG GCAACCAGCG GTGCTCGTCG TCAACCAGCC GACCTGGGGC
GTCGATGCCG GCGCTGCGGC GATCATCCGC CAGGCGTTGA TCGACCTCGC AAGTGCGGGC
GCCGCGGTGC TCGTCACCAG CCAGGATCTC GATGAGCTGA TCGAAATCGC CGACCGCATT
GCCGTGATGT TTCATGGCCG GCTCTCGGCA GCCCTGCCGC GCATGGAAGC CACGCGCGAA
AAACTCGGCC TGCTGATGGG CGGCGCCAGT CTCGACCAGA AGGAGGCCGC GCATGCAACT
CGTGCTTGA
|
|---|
| Protein sequence | MPDPALAHPA PVQPLLQTVG LTKRYGDFLA NDRIDIEIVP REIHALLGEN GAGKSTLVKT
IYGLVQPSGG ELRWQGRPIK LSGPSEARSL GIGMVFQHFS LFDNLTVAEN VALGLDGKEP
LRAVSARLAD VARDYGLPLD PKREVWQLSV GERQRIEIVR ALMQNPKFLI LDEPTAVLTP
QEADQLFIVL ERLKQEGRAI LYISHKLDEV KRLCDTATIL RGGRKVATCN PKLETAGSLA
RMMVGSEIKE VKPSAERRTT VPRLVVNDLT LQPAELHGVR LQNISFELKG GEILGIAGVA
GNGQDELFAA LSGERLVKEP GTIIIDGIAC GNLSISERRK MGAAFVPEER LGHGTAPRMR
LSENALLTGH AAGDMVRHGF INAAATLRTV DRTTETFDVR KAKRDPEAAS LSGGNLQKFV
VGREILRQPA VLVVNQPTWG VDAGAAAIIR QALIDLASAG AAVLVTSQDL DELIEIADRI
AVMFHGRLSA ALPRMEATRE KLGLLMGGAS LDQKEAAHAT RA
|
|---|
| |