Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_2056 |
Symbol | dppA |
ID | 5153256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 2126521 |
End bp | 2128119 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640556993 |
Product | periplasmic dipeptide transport protein precursor |
Protein accession | YP_001238149 |
Protein GI | 148253564 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.184376 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.721299 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACAAAT GTAACCTGCT TGTTGCCGTC TGCGCTTCGG CGTTGCTGGC CTCTCCCGCC GCTTTCGCGA AGACTCTCGT GTTCTGCTCA GAAGGCAGCC CTGAAAATTT CTATCCCGGC ATCAACACGA CCGGGACCTC GTTCGACGGC AATGAGCCGA TCTACAACCG CATTGTCGAG TTCGATCGCG GCAGCACGCA AGTGGTGCCA GGCTTGGCCG AAACATGGAC GATCTCGCCC GACGGCACCA CCTATACGTT CAATCTGCGG AAGGGCGTGA AGTGGCATAC GGCCTCCAAA TCGTTCAAGC CCACGCGCGA CTTCAATGCC GACGACATTC TGTTCTCGAT CGAGCGGCAG TGGAAAGAGG ATCATCCTTA TTTCAAGGTG ACGAGCCCGA ACCATTCCTA TTTCGGAGAC ATGGCGCTGC CGAAACTGTT GAAGTCGGTC GAGAAGATCG ATGACTACAC GATCAAGATC ACCCTCAATC AGCCGGAAGC TCCGTTCCTT GCGGATCTCG CGATGCCGTT CGCCGCGATC CAGTCGAAGG AATATGCCGA TGCGATGCTG AAGGCGGGGA CGCCCGAGAA GATCGACCAG GATCCGATCG GCACGGGTCC GTTCTATCTG GTGCAGTATC AAAAGGATGC GGTGATCCGC TACAAGGCAT TCCCGCAATA TTGGGGCGGC AAGGCCAAGA TCGACGACCT CGTCTATTCG ATCACGCCGG ATTCGTCCGT TCGCTGGGCC AAGCTGCAAA AGGGCGAATG CGACGTGATG CCCTATCCGA ACCCGGCCGA CATCGACGCG ATCAGGAAGG ACCCGAACGT CACGGTCCTC GAACAACCCG GCCTCAATGT CGGCTATCTG GCGTTCAACA CGCAGAAGAA GCCGTTCGAT GATGTCCGCG TGCGCAAAGC CCTGAGCATG GCGATCAACA AGAAGGCGAT CATCGACGCC GTCTATCTGT CGACCGGCAT TGCGGCAAAG AACCCGATCC CGCCGTCGAT GTGGTCCTAC AATGACGACG TCAAGGACGA TCCCTATGAT CCGGAGGCCG CCAAGAAGCT GCTCGCCGAA GCCGGATTTC CCAACGGGCT GGACTCGGAC CTGTGGGCCA TGCCGGTGCA GCGTCCCTAC AATCCGAACG CCAAGCGGAT CGCCGAATTG ATGCAGGCCG ACCTCGCCAA GATCGGGGTC AAGGCCGAGA TCAAGTCGTT CGAATGGGGT GAATATCGCA AGCGATTGCA GGCCGGCGAG CATCAGATGG GCATGTATGG CTGGACCGGC GACAATGGCG ATCCAGACAA TTTCCTGCAC ACTTTGCTCG GTTGCGCCTC GGCCTCGGGC TCGGGCTCGA ACATCGCGAA GTTCTGCTAC AAGCCGTTCG ATGATCTGGT CGTGAAGGCC AAAACGGTCA GCGATCAGGC CGAGCGTGCC AAGCTCTACG CGGAGGCCCA GGTCGTCTTC AAGGAGCAGG CGCCGTGGTA CACCATCGCG CATGCCGTGC AGTTGAAGCC TGTCAGCAAG CGCGTCATCG ACTTCAAACT GTCGCCGTTC GGACGGCACA GCTTCTACGG TGTCGACGTC AAGGACTGA
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Protein sequence | MNKCNLLVAV CASALLASPA AFAKTLVFCS EGSPENFYPG INTTGTSFDG NEPIYNRIVE FDRGSTQVVP GLAETWTISP DGTTYTFNLR KGVKWHTASK SFKPTRDFNA DDILFSIERQ WKEDHPYFKV TSPNHSYFGD MALPKLLKSV EKIDDYTIKI TLNQPEAPFL ADLAMPFAAI QSKEYADAML KAGTPEKIDQ DPIGTGPFYL VQYQKDAVIR YKAFPQYWGG KAKIDDLVYS ITPDSSVRWA KLQKGECDVM PYPNPADIDA IRKDPNVTVL EQPGLNVGYL AFNTQKKPFD DVRVRKALSM AINKKAIIDA VYLSTGIAAK NPIPPSMWSY NDDVKDDPYD PEAAKKLLAE AGFPNGLDSD LWAMPVQRPY NPNAKRIAEL MQADLAKIGV KAEIKSFEWG EYRKRLQAGE HQMGMYGWTG DNGDPDNFLH TLLGCASASG SGSNIAKFCY KPFDDLVVKA KTVSDQAERA KLYAEAQVVF KEQAPWYTIA HAVQLKPVSK RVIDFKLSPF GRHSFYGVDV KD
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