| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2051 |
|---|
| Symbol | dppF |
|---|
| ID | 5152851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 2122362 |
|---|
| End bp | 2123339 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640556989 |
|---|
| Product | dipeptide transporter ATP-binding subunit |
|---|
| Protein accession | YP_001238145 |
|---|
| Protein GI | 148253560 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.953571 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCGC TTGTCACTGC AAATGATCTC AAGCGCAGCT ACGACATCAG GCGTGGCCTG
TTCCGCGCCC CGGCGCAGTT GCAGGCCGTC GGCGGCATAT CCTTTGCGAT CGACGCCGGC
AAGACGCTGG CGATCGTTGG CGAATCCGGT TGCGGCAAGT CGACGCTCGC GCGGCTCGTC
ACTCTGATCG AGAAGCCCAG CGCCGGCACG CTCTCGCTCG ACGGGCTCGA CGCCGTGCAT
CCGCCGGCCG GCGCCGCGAA AGCCTTGCGG CGAACGGTGC AGATCGTGTT CCAGAACCCC
TATGGTTCGC TCAATCCGCG CAAGCGGATC GGCGCCATCC TGGAAGAGCC GCTGATCATC
AACACCAACC TCGGCAAACA GGAGCGTCGG GCGCAGGCGC TCGACATGAT GGCGAAGGTC
GGGCTTCGCC CGGAGCAATA TGGCCGCTAT CCGCACATGT TCTCAGGAGG GCAGCGGCAG
CGTATCGCGA TCGCGCGGGC CTTGATGCTG CGGCCGAAAC TGCTGGTCGC CGACGAGCCG
GTCTCCGCCC TCGACATGTC GGTGCAGGCC CAGGTGCTCA ATTTGCTGGC CGACCTGCAG
CGCGAGCTCG GTCTCGCTTA TCTCTTCATC TCGCATGACC TCGGCGTGGT CAGGCATATC
GCCGATGACG TGCTGATCAT GTATCTCGGC CTGGTCATGG AGCATGGGCC GAAGGAGCGC
ATCTTTGCGC GGCCACTGCA TCCTTACGCA CAGGCTCTTG TCGACGCCAC CCCGGGGCTT
GGCCGCAAGG GACGGCGCAT CGTGCCCAAG GGCGAGTTGC CCTCGCCGCT CGATCCGCCC
GCCGGCTGCG TGTTCTCGAC CCGCTGCCCG CATGTGACGG AGCTCTGCCG CGCACAACGC
CCGCCGCTGC GTCCGCTCGA TGGCCGCCTG GTCGCCTGCC ATGACGCCGA GCGCTTCCTG
GACACACAGC CGGCCTGA
|
|---|
| Protein sequence | MTALVTANDL KRSYDIRRGL FRAPAQLQAV GGISFAIDAG KTLAIVGESG CGKSTLARLV
TLIEKPSAGT LSLDGLDAVH PPAGAAKALR RTVQIVFQNP YGSLNPRKRI GAILEEPLII
NTNLGKQERR AQALDMMAKV GLRPEQYGRY PHMFSGGQRQ RIAIARALML RPKLLVADEP
VSALDMSVQA QVLNLLADLQ RELGLAYLFI SHDLGVVRHI ADDVLIMYLG LVMEHGPKER
IFARPLHPYA QALVDATPGL GRKGRRIVPK GELPSPLDPP AGCVFSTRCP HVTELCRAQR
PPLRPLDGRL VACHDAERFL DTQPA
|
|---|
| |