| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2040 |
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| Symbol | |
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| ID | 5153200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 2109818 |
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| End bp | 2110894 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640556979 |
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| Product | RND family mulitdrug efflux protein |
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| Protein accession | YP_001238135 |
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| Protein GI | 148253550 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.428821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.886334 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATGACGC CGATGCGTTC TGTGTTTCCG GTTCTCGCGC TCGCCGTGCT CGCCGGCTGC
AACGAGAAGA ACGAGGCGCC CGAGCCGATC CGGCCGGTGC TGTCGATGAA GGTCGAGCCG
CAGGCTGCCA ATGCCTCGGC GGTCACCGGC ACGGTCGAGC CGCGCTACAA GGCCGATCTC
AGCTTCCGTG TGCTGGGACG ACTGATCGCC CGGCCGGTCT ATGTCGGCGA CATCGTGAAG
AAGGATCAGG TCGTCGCGGC GATCGATCCC GCCGCGCTCG AGTTGGCGGT TCGCGCCTCG
GTCGCCGACG TGTCCCGCAG CCAGGCGCAG CTGACCAATG CCACCGGCAC CGAAGGCCGG
CAGCGCACCT TGCTGGAAAC CGATGCAACC ACGAAGGCGA CGCTGGAGAG TGCCGAGCAG
TCAAGGGCGG CGGCGCAGGC CTCGGTGATC AAGGCGCAGG CCAATCTTGC CAAGGCGCGC
GAGCAGCTCG GCTACGCCCA GCTGAAGGCG GATTTCGCCG GCATCGTCAC CGCCGTCAGC
GCAGAGGTCG GCCAGGTCGT CTCGCCCGGC GTGAGCGTCG TGACCGTGGC GCGGCCCGAC
ATCCGCGAGG CGGTCATCGA CGTCGGCGAC GACCTCGCAA GCGGATTGCA GGCCGGCACG
CCATTCACGG TGCGTCTCCA GGTCGATCCC AGCGTCAGCG CCTCGGGCAA AGTGCGCGAG
ATTGCGCCAC GCGCCGACGC GACGACGCGC ACCCGCCGTG TCCGCATCGC GCTCGACAAT
CCGCCTGAGA TCATGCGTCT CGGTACCACG GTCACCGCCA GTCTCGATGC GGAGCAGAAG
ATGGTCATCC GGCTGCCGCG CTCGGCCGTG CTGGAGCAAA ACGACAAGCG CTTCGTCTGG
CTGATCGACA CCGCCAGCAA GACGGTGAAG CGGCAGGAAG TCACGATCGC CACCAATGAG
GATGGCAGCC TCCGGGTCAC CGGCGGCCTC GAAGCCGGCC AGCGCGTCGT CACCGCCGGC
GTGAACAGTC TCAAGGATGG CCAGTCCATC CGCATCGATC AGGAAACTCA GCCGTGA
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| Protein sequence | MMTPMRSVFP VLALAVLAGC NEKNEAPEPI RPVLSMKVEP QAANASAVTG TVEPRYKADL
SFRVLGRLIA RPVYVGDIVK KDQVVAAIDP AALELAVRAS VADVSRSQAQ LTNATGTEGR
QRTLLETDAT TKATLESAEQ SRAAAQASVI KAQANLAKAR EQLGYAQLKA DFAGIVTAVS
AEVGQVVSPG VSVVTVARPD IREAVIDVGD DLASGLQAGT PFTVRLQVDP SVSASGKVRE
IAPRADATTR TRRVRIALDN PPEIMRLGTT VTASLDAEQK MVIRLPRSAV LEQNDKRFVW
LIDTASKTVK RQEVTIATNE DGSLRVTGGL EAGQRVVTAG VNSLKDGQSI RIDQETQP
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