Gene BBta_2036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2036 
SymbolregA 
ID5153122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2104274 
End bp2104807 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content63% 
IMG OID640556976 
Productputative photosynthetic apparatus regulatory protein regA 
Protein accessionYP_001238132 
Protein GI148253547 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGATTG AACGCTCTCT TCTGATTGTC GAGGATGACG ACGGCTTCGC GCGCACCCTG 
AAGCGGTCGT TCGAGCGGCG TGGCTATGAG GCCGTGGTCG CCGCCTCGCT CGAGGAAGTC
GACGAGGCCC TGAAAGAGAA GACGTTCGGC TATGCGGTGG TCGATCTGAA GCTCGGCGGC
GCTTCGGGTC TCGTCTGCGT CGAGAAGCTG CATGCGCATG ATCCGGAGAT GCTGATCGTG
GTGCTCACCG GCTTTGCCAG CATCGCCACC GCGGTCGAGG CGATCAAGCT CGGCGCCTGC
CATTATCTCG CCAAGCCGTC GAACACCGAC GACATCGAGG AAGCCTTCCG CAAGGCCGAG
GGCAATGCGC AGATCGCGCT CCCCGAGCGC TCCACCTCGA TCAAGACCCT GGAATGGGAA
CGCATCCACC AGACCCTGAT CGAGACCGAC TTCAACATCT CCGAGGCGGC ACGACGGCTC
GGCATGCATC GCCGCACCTT GGCCCGCAAG CTCGAAAAGC GGCCAGTGAA GTAG
 
Protein sequence
MEIERSLLIV EDDDGFARTL KRSFERRGYE AVVAASLEEV DEALKEKTFG YAVVDLKLGG 
ASGLVCVEKL HAHDPEMLIV VLTGFASIAT AVEAIKLGAC HYLAKPSNTD DIEEAFRKAE
GNAQIALPER STSIKTLEWE RIHQTLIETD FNISEAARRL GMHRRTLARK LEKRPVK