Gene BBta_2031 details

Gene Information

• Locus tag: BBta_2031
• Symbol: cyoB
• ID: 5152948
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bradyrhizobium sp. BTAi1
• Kingdom: Bacteria
• Replicon accession: NC_009485
• Strand: +
• Start bp: 2099043
• End bp: 2101052
• Gene Length: 2010 bp
• Protein Length: 669 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 640556971
• Product: cytochrome o ubiquinol oxidase, subunit I
• Protein accession: YP_001238127
• Protein GI: 148253542
• COG category: [C] Energy production and conversion
• COG ID: [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1
• TIGRFAM ID: [TIGR02843] cytochrome o ubiquinol oxidase, subunit I

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0504466
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 37
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTTTGATA CAGCAGATCT CACCAAGCTC ATCTTCGGCC GGCTGACCCT GGAGTCGCTG 
CCGCTGCACG AGCCGATCAT CGTCGGCACT TTCGCGATGG TCGCGCTCGG CGGCCTCGCG 
CTGTTCGGCG CCATCACCTA TTTCCGGCTC TGGGGCTACC TCTGGAGGGA ATGGTTCACC 
ACCGTCGACC ACAAGCGCAT CGGCATCATG TACATGGTGC TTGGCATCGT CATGCTGCTG 
CGCGGCTTCG CGGACGCGCT GATGATGCGG CTGCAGCAGG CGATCGCCTT CAACGGCTCG 
GAAGGCTATC TCAATTCGCA CCACTATGAT CAGGTGTTCA CGGCGCATGG CGTGATCATG 
ATCTTCTTCG TGGCGATGCC GCTGGTCACC GGCCTGATGA ACTATGTCGT GCCGCTGCAG 
ATCGGCGCCC GCGACGTCTC GTTTCCGTTC CTCAACAATT TCAGCTTCTG GATGACCACG 
GCCGGCGCCG TGCTGGTGAT GTGCTCGCTG TTCGTCGGCG AGTTCGCCCG CACCGGCTGG 
CTCGCTTATC CGCCGCTGTC GAACCTGTCC TACAGTCCGG ACGTCGGTGT CGATTATTAC 
ATCTGGGCGC TGCAGGTCGC CGGCGTGGGC ACGCTGTTAT CCGGCGTCAA CTTGATCTGC 
ACCATCGTGA AGATGCGGGC GCCCGGCATG ACCATGATGA AGATGCCGGT CTTCACCTGG 
ACCTCGCTCT GCACCAACGT GCTGATCGTC GCCTCCTTCC CGGTGCTGAC GGCGGTGCTC 
GCGCTGCTGT CGCTCGACCG CTATGTCGGC ACCAACTTCT TCACCAATGA TTTCGGCGGT 
GATCCGATGA TGTATGTGAA CCTCATCTGG ATCTGGGGGC ATCCGGAGGT CTACATCCTG 
ATCCTGCCGG CGTTCGGCAT CTTCTCCGAG GTGACCTCGA CCTTCTCGGG CAAGCGCTTG 
TTCGGCTACA CCTCGATGGT TTATGCCACC GTCGTCATCA CCATCCTGTC CTATCTGGTC 
TGGCTGCACC ATTTCTTCAC GATGGGCTCG GGCGCCAGCG TGAACTCGTT CTTCGGCATC 
ACCACGATGA TCATTTCGAT CCCGACGGGC GCGAAGATGT TCAACTGGCT GTTCACGATG 
TATCGCGGCC GCATCCGCTT CGAGCTGCCG ATGATGTGGA CGGTGGCCTT CATGCTGACC 
TTCGTGATCG GCGGTATGAC CGGCGTGTTG CTGGCGGTGC CGCCGGCCGA CTTCGTGCTG 
CACAACAGCC TGTTCCTGGT CGCGCATTTC CACAACGTCA TCATCGGCGG TGTGCTGTTC 
GGCCTGTTCG CCGGCATCGC CTACTGGTTC CCGAAGGCGT TCGGCTTCAA GCTCGACGTG 
TTCTGGGGCA AGATGTCGTT CTGGTTCTGG ACCGTGGGCT TCTATTTCGC CTTCATGCCG 
CTCTACGTGC TCGGCCTGAT GGGGGTGACC CGGCGGCTGC GCACCTTCGA CGATCCGAGC 
CTGCAGATCT GGTTCGTCAT CGCCGGCATC GGCGCGTTTC TGATCCTGCT GGGAATCGCG 
AGCTTCCTGA TCCAGATCGC GGTCAGCATA CTCCGCCGCG AACAGCTCGC CGATGTCAGC 
GGCGATCCCT GGGATGCGCG CACGCTGGAA TGGGCGACGT CGTCGCCGCC GCCGGCCTAC 
AATTTCGCCT TCACGCCCGT GGTGCACGAC AACGACGCCT GGTGGGACAT GAAGCGCCGC 
GGCTACGTGC GTCCGCTCGC CGGCTTCAAG GCGATCCACA TGCCGAGCAA CACCGGCACC 
GGCGTGATCC TGGCGGGCCT CAGCACCACC ATGGCGTTCG GCCTGATCTG GTACATGTGG 
TGGATGGCGG CCGGCAGTTT CGTTGCGCTG CTGGCCGTCG CGATCGGCCA CACCTTCAAC 
TATCACCGCA GCTTCCACAT TCCGGCCGAT GAGGTTGTCA GCGTCGAGCG CGCGCGGACC 
GAGCTGCTCG CCGCAGGAGC CAAGTCATGA 

 

Protein sequence

MFDTADLTKL IFGRLTLESL PLHEPIIVGT FAMVALGGLA LFGAITYFRL WGYLWREWFT 
TVDHKRIGIM YMVLGIVMLL RGFADALMMR LQQAIAFNGS EGYLNSHHYD QVFTAHGVIM 
IFFVAMPLVT GLMNYVVPLQ IGARDVSFPF LNNFSFWMTT AGAVLVMCSL FVGEFARTGW 
LAYPPLSNLS YSPDVGVDYY IWALQVAGVG TLLSGVNLIC TIVKMRAPGM TMMKMPVFTW 
TSLCTNVLIV ASFPVLTAVL ALLSLDRYVG TNFFTNDFGG DPMMYVNLIW IWGHPEVYIL 
ILPAFGIFSE VTSTFSGKRL FGYTSMVYAT VVITILSYLV WLHHFFTMGS GASVNSFFGI 
TTMIISIPTG AKMFNWLFTM YRGRIRFELP MMWTVAFMLT FVIGGMTGVL LAVPPADFVL 
HNSLFLVAHF HNVIIGGVLF GLFAGIAYWF PKAFGFKLDV FWGKMSFWFW TVGFYFAFMP 
LYVLGLMGVT RRLRTFDDPS LQIWFVIAGI GAFLILLGIA SFLIQIAVSI LRREQLADVS 
GDPWDARTLE WATSSPPPAY NFAFTPVVHD NDAWWDMKRR GYVRPLAGFK AIHMPSNTGT 
GVILAGLSTT MAFGLIWYMW WMAAGSFVAL LAVAIGHTFN YHRSFHIPAD EVVSVERART 
ELLAAGAKS