| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2024 |
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| Symbol | |
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| ID | 5152748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 2088960 |
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| End bp | 2089979 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640556964 |
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| Product | putative TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| Protein accession | YP_001238120 |
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| Protein GI | 148253535 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.140424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAGG TGAGCCGTCG TGCGTTGTTG ACCACTGCAG CCGGCGCCGC CGCTGGCTGT
CTCGTGCAGA GCCCGGCCGT GCTGGCCCAG GCTGCGCCGC TCAAGCTGAA ATTTGGCAAC
GATCTGCCGG CCACGCACGC GGTCAACGTG CGGCTGCGCG AGGCCGTCGA GGCGATCACC
GCGGAGACCA AGGGGCAGGT CGAGATCAGC CTGTTTCCGA ACAACCAGCT CGGCAGCGAC
AGCGACATGA TCACCCAGCT GCGTTCCGGC GCGCTCGAGC TCGCGACCAT GCCGGGCACC
GTGCTGTCGA CGTTGATCCC GACGGCGTCG CTGACCGGCG TCGGCTTCGC CTTCACCAGC
TACGATAAGG TGTGGGCCGC GATGGACGGC GAGGTCGGTG GCTTCATCCG CCGCAACATC
GAGAAGGTGG GGCTGTTTCC GTTCGAGAGC GTCTGGGACA ATGGCTTCCG CCAGATCACG
ACCAGCACCA AGCCGATCAC CGCGCCGGCC GATCTCGCCA ACTTCAAGAT CCGTGTGCCC
GTCGTGCCGC TGTGGGTCGC GATGTTCTCG GCGTTCGGCG CCTCGCCGAT CAGCGTGCCC
TTGAGCGAGG CCTATTCGGC GCTGCAGACC AGGATCGCCG ACGGCCAGGA GAACCCGCTG
GCGCTGATCG ATTCCGCCAA GTTCTACGAG GTGCAGAAAT TCTGCTCGCT GACCAATCAC
AGCTGGGACG GCTTCTGGCT GCTGTCCAGC GGCAAGATCT GGAAGACGAT CCCGCAGGAC
GTCCAGAAGC TGCTGCAGAC GACGTTCAAC GCGGCCGCCA GGAAGCAGCG CAACGATATC
GTCCAGGCCA ACGCCGATCT GCAGAAGAGC TTGGAAGGCA AGGGCCTGAC CTTCAACAAG
ACCGATGCCG AGCTGTTCCA GGCGACCCTG GCCAAAACCA GTTTCTACAA GGACGCCAAG
ACGAAGTTCG GCGACGAGGC CTGGGCGCTG CTGCAGCGCT ACGCCGGAAA TATCAGCTGA
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| Protein sequence | MLKVSRRALL TTAAGAAAGC LVQSPAVLAQ AAPLKLKFGN DLPATHAVNV RLREAVEAIT
AETKGQVEIS LFPNNQLGSD SDMITQLRSG ALELATMPGT VLSTLIPTAS LTGVGFAFTS
YDKVWAAMDG EVGGFIRRNI EKVGLFPFES VWDNGFRQIT TSTKPITAPA DLANFKIRVP
VVPLWVAMFS AFGASPISVP LSEAYSALQT RIADGQENPL ALIDSAKFYE VQKFCSLTNH
SWDGFWLLSS GKIWKTIPQD VQKLLQTTFN AAARKQRNDI VQANADLQKS LEGKGLTFNK
TDAELFQATL AKTSFYKDAK TKFGDEAWAL LQRYAGNIS
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