| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2006 |
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| Symbol | hypA |
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| ID | 5150435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 2071212 |
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| End bp | 2071544 |
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| Gene Length | 333 bp |
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| Protein Length | 110 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640556947 |
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| Product | hydrogenase expression/formation |
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| Protein accession | YP_001238103 |
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| Protein GI | 148253518 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) |
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| TIGRFAM ID | [TIGR00100] hydrogenase nickel insertion protein HypA |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.321644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGCTGT GCGAGGGCAT CGTCGATATC GTTGAGCAGG AAGCCCGCAA GGGCGCGTTT
TCCAGGGTCA AGACCGTCTG GCTCGAGATC GGTACGCTCA GCCATGTCGC TCCCGATGCG
CTCCGTTTCT GCTTCGAGGC GGTGACGGCC AATACCATCG CGCGCGGCGC GGCGCTGGAG
ATCATCGAGC AACGCGGCAC GGCCTGGTGT CTGTCCTGCT CGCGGAGCGT CGAGATCAGC
CAACGTTACG ATCCTTGCCC CGCCTGCGGC AGCCATCAGC TGCAGGTGAC GGGCGGCGAG
GATATGCGGG TCAAGGAGCT GGAGGTCGAG TGA
|
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| Protein sequence | MALCEGIVDI VEQEARKGAF SRVKTVWLEI GTLSHVAPDA LRFCFEAVTA NTIARGAALE
IIEQRGTAWC LSCSRSVEIS QRYDPCPACG SHQLQVTGGE DMRVKELEVE
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