| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2004 |
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| Symbol | hupJ |
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| ID | 5152084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 2069604 |
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| End bp | 2070107 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640556945 |
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| Product | hydrogenase expression/formation |
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| Protein accession | YP_001238101 |
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| Protein GI | 148253516 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.268967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGCCG TCCTGGCAGG GCAGGGCACG ATGGAGCTCG CACCGGCCGC GTGGGGCGAG
CATCTCGCCA GCATCTATCG CGAGATCGGC GGACGCGCGA TGCGCGAGCT GCCGATCTAT
CACGATGCGC TGACTGTCGA GGCCGTGGGC TTCGACAGTT TCGCAGGAAT GACGATCGGC
ATCGTCATCA CGCCGTGGTT CATGAACGTG GTCACGCCGG CCCGGCATGG CGCACCTGGA
GCCTCCGTCG CGATTGAGCT GCCGGCTGGG ACGTTCGAGT TCACCATCGG CGATGTCGAA
GGCTTTGGAC GCATCGCCAG TTGCTCGCTG TTCTCGCCGA TGTTCCAGTT CGAGGACATG
GCGGCGGCGC GCGCCGCGGC CGAGGCCGCG CTGGCGACGC TGCTGACGGC GCCCGACGCG
GAGGAATTGC CGAGATCTGC CGCCGCGAGC GCGATCGACC GCCGCTCCTT CTTGCGCGGC
ACCTTGTCGG AGCGCCGCGC ATGA
|
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| Protein sequence | MSAVLAGQGT MELAPAAWGE HLASIYREIG GRAMRELPIY HDALTVEAVG FDSFAGMTIG
IVITPWFMNV VTPARHGAPG ASVAIELPAG TFEFTIGDVE GFGRIASCSL FSPMFQFEDM
AAARAAAEAA LATLLTAPDA EELPRSAAAS AIDRRSFLRG TLSERRA
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