Gene BBta_1985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1985 
Symbol 
ID5151919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2050661 
End bp2051557 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content69% 
IMG OID640556926 
Productputative hydroxyacid dehydrogenase/reductase 
Protein accessionYP_001238082 
Protein GI148253497 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.300196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC CGCAAAGCGC CCTGTTCGTC GGCATCGGCA ATATGGGCTG GCCGATGGCC 
GCGCGCCTGC TCGGCGCCGG CATCGCAGTC GCGGTCAATG ACGCAGTGCC GGGCCGCGCC
GCCGATTTCG TGCGGCAGGT CGGCGGCGTC GAAGCGGTGG ATCTCGCGGC CGCTGCGGCG
GCGGCCGATG TGGTCATCAC GATGCTGCCG ACCAGCAGGC ATGTCGCCGA CGCCGTCGCG
GCGCTGCGTG CCGGCCTGAA GCAGGGTCAC GTCGTCATCG ACATGAGTTC CGGGGCTCCG
GCGGCGACGC AGGCGATTGC GGCCGATCTC GATGTGCTCG GCGTCACCAT GCTCGACGCG
CCGGTCAGCG GCGGCGTGTC GCGCGCGGTG ACCGGTGAGC TCGCGATCAT GGCGGGCGGC
GATGCCGCCG CACTCGATCG CGTCGAGCCG TTGCTGCGCG CGATGGGCAC CACCATCCAC
CGCATCGGCG GCCTCGGCTC CGGGCAGGCG ATGAAAGCGC TCAACAACCT CGTTTCAGCC
GGCGGCTTCC TGATCGGCAT CGAGGCGCTG CTGATCGGCC AGCAATTCGG CATCGATCCC
GGCCTGATGA CGGACGTGCT GAATGCGTCG ACGGGCATGA ACAATTCGAC GCAGAAGAAG
TTCAAGCAGT TCGTCCTGTC GCGCAAGTTC AACAGCGGCT TCGGGCTCGA TCTCATGGTG
AAGGACCTCT CGATCGCGCT TGAGGTCGCG CGCGCCAGCG GCGTCGCCGC GCCGTTCTCC
AATCTTTGCC GCGAACTGAG CGCCAGCGCG CAGGCCCTGC TCGGGCCGGG CCAGGACCAC
ACGGCGCTGG CAAGGCTGAG CGAGGCGCTG GCGGGCGTCG AACTCGGTCA GGAGTGA
 
Protein sequence
MSAPQSALFV GIGNMGWPMA ARLLGAGIAV AVNDAVPGRA ADFVRQVGGV EAVDLAAAAA 
AADVVITMLP TSRHVADAVA ALRAGLKQGH VVIDMSSGAP AATQAIAADL DVLGVTMLDA
PVSGGVSRAV TGELAIMAGG DAAALDRVEP LLRAMGTTIH RIGGLGSGQA MKALNNLVSA
GGFLIGIEAL LIGQQFGIDP GLMTDVLNAS TGMNNSTQKK FKQFVLSRKF NSGFGLDLMV
KDLSIALEVA RASGVAAPFS NLCRELSASA QALLGPGQDH TALARLSEAL AGVELGQE