Gene BBta_1980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1980 
Symbol 
ID5151125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2045438 
End bp2046541 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content66% 
IMG OID640556921 
Productputative FMNH2-dependent aliphatic sulphonate monooxygenase 
Protein accessionYP_001238077 
Protein GI148253492 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGTCG AATTCATCGG TGCCTTGGGC TCGCGCGAGG GGAGCGAGTC GCTGCCCCCC 
AGCGGTCCCG TGATCGATCC CGCCTATGTC GCCGCCATCG CCCGCGCCCA TGAATATGCC
GGCTTCGACA AGGCGCTGGT CGGCTATCAC AGCAGCCAGC CCGACGGCTT CCAGGTCATC
GCCTACGCGG CGCAGCACAC CGAGCGGCTG AAGTACCTGC TCGCGCACCG TCCCGGTTTT
CTGCCGCCGA CGATCGCCGC CCGCAACCTC GCCTCGCTCG ACCATTTCAG CAAGGGACGG
CTGTCGGTCC ACATCATCAC CGGTGGCGAC GACGCCGACC AGCAGCGCGA CGGCGATTTC
CTGAGCCACG ACGAGCGTTA CGCCCGCACC GACGAGTTCC TGGACGTGGT CAAGACGTTC
TGGGCGAGCG CCGGCCCGTT CGACCATGAA GGCACCTACT TCAAGATCCG GAACAGCCTT
GCGGCGCTCA AGCCGTTTGG ACCATCGGGT ATCCCGATCT ATTTTGGCGG GTCATCCGAG
GCCGCCCTCG AGGTCGGCGC CAAGCACGCG GATGTCTACG CGATGTGGGG CGAGAGTCTC
GAAGAGGTGC GCGAGACGAT TGCGCGTGTT CGGGCCGCCG CCGCGAAGTG GAACCGCGCC
GACCGGATTC GCTTCAGCCT GTCGCTGCGT CCGGTGATCG GTCGCACGGA GGCTGAAGCA
TGGAGTCGCG CCGAGTACAT CTATGAGACC GCCAAGTCGC TCAGCGCTCC CGCACCCGCC
ATTGTTCATC CCGCTCAAAG CGTCGGCATG CAGCGGCTGC GCGCTGCCGC CGGTCGTGGC
GCCGTGCTCG ACAAGAGGCT ATGGACCAAG TTGGCTTCGC TGCCGAACGC GCGAGGCAGT
ACGACCGGCC TGGTAGGCAC CGGCGAGCAG ATCGCCGAGG CTCTGCTCGA ATACCACAAG
TTGGGTATTA CCGCTTTCTT GATACGCGGT TTTGACCCGA TTCAGGACGC GCTGGCCTAC
GGTCGAGAGA TCCTGCCCAG GGTTCGCGAG GCGGTGGCGC AGCGCGACGA GGCCTTTGGC
GTTGTAACCG CCGAGGTCGC GTGA
 
Protein sequence
MPVEFIGALG SREGSESLPP SGPVIDPAYV AAIARAHEYA GFDKALVGYH SSQPDGFQVI 
AYAAQHTERL KYLLAHRPGF LPPTIAARNL ASLDHFSKGR LSVHIITGGD DADQQRDGDF
LSHDERYART DEFLDVVKTF WASAGPFDHE GTYFKIRNSL AALKPFGPSG IPIYFGGSSE
AALEVGAKHA DVYAMWGESL EEVRETIARV RAAAAKWNRA DRIRFSLSLR PVIGRTEAEA
WSRAEYIYET AKSLSAPAPA IVHPAQSVGM QRLRAAAGRG AVLDKRLWTK LASLPNARGS
TTGLVGTGEQ IAEALLEYHK LGITAFLIRG FDPIQDALAY GREILPRVRE AVAQRDEAFG
VVTAEVA