Gene BBta_1975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1975 
Symbol 
ID5152122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2040731 
End bp2041588 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content65% 
IMG OID640556916 
ProductABC transporter ATP-binding protein 
Protein accessionYP_001238072 
Protein GI148253487 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCC TGCCACCTTT GCTCTCGGTC GACCAGCTCG ACGTGACATT CGATGGACCG 
CGCGGACTGG TGCGGGCCGT GCGTCAGGTC TCGTTCCAAC TTCAAGCGAG GGAGGTGCTG
GCGATCATCG GAGAATCGGG TTCTGGCAAG TCCACCCTTG CTCGTGCCGT GATGGGCATG
ATCCCGAATC GTGCAGGCCG GATCGCTCTG AACGGCGAGC CGTTGGCCGC CGCGGCGGGA
GCCCGCTCCC GGGCGCAGAG GCGACGGCTC GGCATGGTGC TCCAGGACAG CGGTGCCGCC
TTCGATCCGC GTTTCACCGT CAGACGGATT CTGTTGGAGC CGCTGAGGTC ACTGCGCGGC
GAGCAAGACT CGCCTGCGCC GGAACGGCTG CTTGAGGATG TCGGCTTGTC GGCCGCCCTC
CTCGATCGCT ATCCCCACGA ATTGTCGGGC GGTCAACGTC AACGGCTGAG TATTGCCCGT
GCCCTGGCCT GCTCACCTTC GCTCCTGATT TGCGATGAGG CGGTTTCTGC CCTCGATCTA
TCTGTCCAGG CGCAGATTCT GAACCTGCTA TCGAACCTCC AGGAACGGCG CGGCCTGGCC
TTCCTGTTCA TTACCCACGA TGTGGCGGTG GTTGAGTATT TGGCCGACCG AATTGCCGTG
ATGTACCGCG GCGAGATCCT CGAATGTGCC CCGGCCGCTG ACGTGCTGGA CCGTCCATCG
CATCCCTACA CCCGCGCGCT GCTGGCGTCG GCGAAGGGCA CCGCGCTGGC CGGTGACGCA
ACGATCGCCC TGTCAAAACA CCGACGGCAG TCGCCCATGC GGTCAGCATC ACGCCAGGAC
GACAACCTGC CGTCCTGA
 
Protein sequence
MSGLPPLLSV DQLDVTFDGP RGLVRAVRQV SFQLQAREVL AIIGESGSGK STLARAVMGM 
IPNRAGRIAL NGEPLAAAAG ARSRAQRRRL GMVLQDSGAA FDPRFTVRRI LLEPLRSLRG
EQDSPAPERL LEDVGLSAAL LDRYPHELSG GQRQRLSIAR ALACSPSLLI CDEAVSALDL
SVQAQILNLL SNLQERRGLA FLFITHDVAV VEYLADRIAV MYRGEILECA PAADVLDRPS
HPYTRALLAS AKGTALAGDA TIALSKHRRQ SPMRSASRQD DNLPS