| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1954 |
|---|
| Symbol | |
|---|
| ID | 5149983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 2019617 |
|---|
| End bp | 2020510 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640556897 |
|---|
| Product | branched chain amino acid ABC transporter permease |
|---|
| Protein accession | YP_001238053 |
|---|
| Protein GI | 148253468 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGAGG TTCTGTTCAT CGGTCTCAGC CTGGGATCGA TCCTGCTGCT GGTCGCGCTC
GGCCTCGCCA TTACTTATGG CGCGATGGGC GTCATCAACA TGGCGCATGG CGAGATGGTC
ATGGTCGGCG CCTATGTGAC CGTGCTGTCG GGCCTGTGGT TCGGCACCGA CATCTTCATT
GCCATCCCGC TCGCCTTCAT CGTGACAGCG CTGCTCGGGC TGCTGATCGA GCGCGTCGTG
GTCCGCAAGC TCTACGGCCG GCTGCTCGAC ACGCTGCTCG CGACCTGGGG CATTGCGATC
CTGATCCAGC AGGCGGTGCG GCTCGAGTTC GGGCTGTCGT TCCTCGGCAT CCACATTCAG
GGCCTCGGGC CCGGCCTGCA GAACGTCAGC GTCCCCGACA TCCTGCAGGG CACGTTTCGT
TTCGCCGGCG CCGACATCAA CCGCTATCGC GCCTTCATCA TCCTGGTGAC CGCCATGCTC
GCCATCGCCA CCTGGTTCGT GATCTATCGC ACCGTGGCCG GCACGCAGGT TCGCGCCATC
ATCCGCAACC CGAAGATGGC CGCCGCCTGC GGCATCGACG TCACCCGCGT CAATGCGCTG
ACCTTTGCGT TCGGTTCGGG TCTTGCGGGT GTCGCCGGCG TGATGATGTC CGGCTTCAAG
ACCGTGTTCC CCGACATGGG GACCTCGATG GTGGTCGACG GCTTCCTCGT GGTCGTCATG
GGCGGCGTCG GCAGCCTGCT CGGTTCGGTG CTGTCGGCCG GCATTCTCGG CGAGATCAAC
GGCCTGGTCG CCGCCGCGAC CAACGACATC CTCGCCCGCG CCGTCGTGTT CGGCGTCGTC
ATCGCCATCA TCGTGCTCAA GCCGAAGGGC CTGTTCGCCC TGAAGGGACG CTGA
|
|---|
| Protein sequence | MLEVLFIGLS LGSILLLVAL GLAITYGAMG VINMAHGEMV MVGAYVTVLS GLWFGTDIFI
AIPLAFIVTA LLGLLIERVV VRKLYGRLLD TLLATWGIAI LIQQAVRLEF GLSFLGIHIQ
GLGPGLQNVS VPDILQGTFR FAGADINRYR AFIILVTAML AIATWFVIYR TVAGTQVRAI
IRNPKMAAAC GIDVTRVNAL TFAFGSGLAG VAGVMMSGFK TVFPDMGTSM VVDGFLVVVM
GGVGSLLGSV LSAGILGEIN GLVAAATNDI LARAVVFGVV IAIIVLKPKG LFALKGR
|
|---|
| |