| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1953 |
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| Symbol | |
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| ID | 5149982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 2018322 |
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| End bp | 2019554 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640556896 |
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| Product | putative aliphatic amidase expression-regulating protein (amiC) |
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| Protein accession | YP_001238052 |
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| Protein GI | 148253467 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGAGCG GCGCCCTGGC GGGCGGCGCA TTGATTACCT CGCCATGGGT GTTCTCGACC
GGCGCGCAGG CCGCTGGCGA GATCAAGGTG GGCGTGCTGT TTTCGCTGAC GGGTGGCCTC
TCGATCGTGG AGAAGTCGCT GCACGACGCC ACGATGATGG CGATCAGCGA GATCAACGCG
GCCGGCGGCG TCAAGGGCAT GAAAATCTCG GCGATCGCCG AGGACGGCGC CTCCGATCCC
AAGACCTACA ATGAGAAGGC CTCCAAGCTC GTCATCCAGG ATCGCGTTCC GACCGTGTTC
GGCTCCTATA CCTCGGCGAG CCGCAAGGCG GTGCTGCCGG TGTTCGAGAA GCGCAACAAT
CTCTATTTCT ATCCGACCTA TTATGAAGGC TTCGAGTGCT CGAAGAACGT CGTCTATACC
GGCGCCGTTC CGAACCAGCA GCTGTCGAAT TTCATCCCTT GGATCATCAA GACGCTCGGC
AAGAAGAAGT TCTTTATCGT CGGATCGAAC TACATTTATC CACGCGAGAT GGCCAAGGTC
TCGAAGATCC TGATCGAAAA GAACGGCGGC GAATGGATCG CCGACGAATA TCTCGAGCTC
GGCCATTCCG AATGGGGCTC GATGGTCAAC AAGATCAAGA GCTCGGGCTG CGATGTCGTG
CTGTCCAACG TGGTCGGCGA CTCCGTGATC GCGTTCTATC GCGAGTACAA GAACCAGGGC
CTCACCCACG ACAAGCTGCC GATCTGCGCG ACCGTCACCT CGGAGATTGA GATTGCGGCG
ATGGGCGCGG AATATGCGGT CGGTTCCTTC ACCTCGTTCC CGTATTTCCA GGCGATCGAC
ACCGATCGCA ACAAGGCGTT CATCGAGCGC TACCGCAAAT TCGTCAAGGA CCCGAAGGCG
GTGACGCATC ACGCGCTGGA ATCGTCCTAC TTCCAGGTGT TCCTGTGGAA GCAGGCGGTG
GAAAAGGCGG CCGAGATCTC GCCGGCGGCG ATCCGCGAGG CCGTCAAGGG CCAGGAGTTC
GACGCGCCCA ACGGCCACGT CAAGATCGAG GCCGAGAACC TGCACACCTA CCTGACGCCG
CGCATCGCGC AGTGGCTTCC GGACGGGCAG GGCAAGATCA TCGACGCCTA CAAGGAGCCG
GTCATGCCGC TTCCCTACGT CGCCTATGGC GAGACGCCGA CGAACCTTTT CTGCACCGGG
AAGGGTCTCG ACGCGGCCAA GCTGAAAACC TGA
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| Protein sequence | MKSGALAGGA LITSPWVFST GAQAAGEIKV GVLFSLTGGL SIVEKSLHDA TMMAISEINA
AGGVKGMKIS AIAEDGASDP KTYNEKASKL VIQDRVPTVF GSYTSASRKA VLPVFEKRNN
LYFYPTYYEG FECSKNVVYT GAVPNQQLSN FIPWIIKTLG KKKFFIVGSN YIYPREMAKV
SKILIEKNGG EWIADEYLEL GHSEWGSMVN KIKSSGCDVV LSNVVGDSVI AFYREYKNQG
LTHDKLPICA TVTSEIEIAA MGAEYAVGSF TSFPYFQAID TDRNKAFIER YRKFVKDPKA
VTHHALESSY FQVFLWKQAV EKAAEISPAA IREAVKGQEF DAPNGHVKIE AENLHTYLTP
RIAQWLPDGQ GKIIDAYKEP VMPLPYVAYG ETPTNLFCTG KGLDAAKLKT
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