Gene BBta_1951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1951 
Symbol 
ID5149980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2016236 
End bp2017402 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content63% 
IMG OID640556894 
Productputative aliphatic amidase expression-regulating protein (amiC) 
Protein accessionYP_001238050 
Protein GI148253465 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTCTT CAGAAAGGCA GCCTGAAAGC TGGCGCGTCG GCGTGCTGTT TTCGCATACC 
GGCGTGACCT CGGGCATCGA ACGCACACAA CTCAACGCCA CCTTGCTGGC CATCTCCGAG
ATCAACGCTG CCGGCGGTAT TCTCGGTCGC CCCATCGAGC CGATCATCTA CGACCCTGCT
TCGGACCCGA AGAAGTTCCG CGCCTTTGCC GAGCGCCTGT TCCAGGTCGA CCGCATCCGT
CTGTTGTTCG GCTGCTACAT GTCGAGCACG CGCAAGGCCG TGCTGCCTTC GGTCGAGGGC
CATCGCGGTC TGCTGTTCTA CCCGACCCTT TATGAAGGGT TCGAATATTC CCGCAACTGC
ATCTACACCG GCGCCGCGCC GAACCAGAAT TCGCTGCAGC TGGCGCGCTT CCTGCTCTCG
ACCTATGGCA ACCGCTTCCT GTTCGTTGGC TCGAACTATG TCTTCCCTTA TGAGTCGAAC
CGCCTGATGG CCGATTTCGT GGTCCAGGGC AAAGGCAAGG TGCTGGACGA GATCTATGTT
CCGCTGCTTG CGCAAGCCAA GGATTTCGAC AAGGTCATCG CCCGCATCAA GAAGACGTCG
CCGGACGTGA TCTTCTCGAC GGTCGTGGGC AGCGGGACAG CCGAGTTCTA TCGCGCCTAT
CGCGCCGCCG ATTTCGATCC GACACGGATG CCGATCGCGA GCCTCAGCAC CAGCGAGGCC
GAGGTGGCCG AGATGGGGGC GGAGGCCGCC GAAGGCCACA TCACTGCGGC GCCGTTCTTC
GAGACGTTGT CGTCGCAGGC CGCGCGGCGG TTCGTTGCAA GTTTCAAGGC GCAATATGGC
GACGATGCGC CGGTGACGGC CTGCGCCGAA GCGGCCTATT TTCAGGTCCA TCTGGCGATG
CGCGCGGTGG CCAAATGCGG CACGGATGAT CCGGAGCAGG TGCTCGGCAA CATGCGCGAT
TTCGAGTTCG ACGCGCCGCA GGGGCGGGTC CGTGTCGATC CCGAGAACAA TCACACTTAC
CTATGGCCGC GGATCGCGCG GGTCGACGGC CAGGGGCGCT TCCAGATCGT CTGGAATCCG
GGCGTGCGCG TGAAGCCCGA TCCCTATTGT GTGGTCCAGA GCCTCGACGA CTGGTCGGTC
GACGAGCAGC AGCTCATTCG GTCCTGA
 
Protein sequence
MGSSERQPES WRVGVLFSHT GVTSGIERTQ LNATLLAISE INAAGGILGR PIEPIIYDPA 
SDPKKFRAFA ERLFQVDRIR LLFGCYMSST RKAVLPSVEG HRGLLFYPTL YEGFEYSRNC
IYTGAAPNQN SLQLARFLLS TYGNRFLFVG SNYVFPYESN RLMADFVVQG KGKVLDEIYV
PLLAQAKDFD KVIARIKKTS PDVIFSTVVG SGTAEFYRAY RAADFDPTRM PIASLSTSEA
EVAEMGAEAA EGHITAAPFF ETLSSQAARR FVASFKAQYG DDAPVTACAE AAYFQVHLAM
RAVAKCGTDD PEQVLGNMRD FEFDAPQGRV RVDPENNHTY LWPRIARVDG QGRFQIVWNP
GVRVKPDPYC VVQSLDDWSV DEQQLIRS