| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1948 |
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| Symbol | soxD |
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| ID | 5151719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 2013487 |
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| End bp | 2013750 |
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| Gene Length | 264 bp |
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| Protein Length | 87 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640556891 |
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| Product | sarcosine oxidase, delta subunit |
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| Protein accession | YP_001238047 |
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| Protein GI | 148253462 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4311] Sarcosine oxidase delta subunit |
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| TIGRFAM ID | [TIGR01374] sarcosine oxidase, delta subunit family, heterotetrameric form |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.593467 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGAATTC CCTGCCCGTT CTGTGGCGAG CGCGACGTCA GCGAGTTCGC CTATCACGGC
GACACCGCAA AGCGGCCTGA TCCGGCCACC GACGACGGTC AGCGGCGCTT CTTTGAGGCC
GTCTATCTGC GCGACAATCC CGCCGGCCCG CATCGCGAAC TCTGGTATCA CGCACAGGGT
TGCCGCAGCT GGTTGATCGT GACCCGCGAC GTCCGGACCC ACGAGGTGCT CGGCGCCGCG
CTCGCCACGC GAGGCGCGGC ATGA
|
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| Protein sequence | MRIPCPFCGE RDVSEFAYHG DTAKRPDPAT DDGQRRFFEA VYLRDNPAGP HRELWYHAQG
CRSWLIVTRD VRTHEVLGAA LATRGAA
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