Gene BBta_1944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1944 
Symbol 
ID5151754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2006980 
End bp2008305 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content67% 
IMG OID640556887 
Productputative large subunit of glutamate synthase 
Protein accessionYP_001238043 
Protein GI148253458 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0069] Glutamate synthase domain 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.438663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTGC CTCCACATCG CACCCCGCCG CGTTTCTCCG CGACCTTCAA CCCGAACGTG 
ATCGCCGAGA TCCAGCGGGC TGCAGCAACC GGCATTTACG ATATCCGCGG CGGCGGCGCC
AAGCGCGCGC TGCCGCATTT CGACGATCTC CTGTTCCTGG GCGCCTCGAT CTCGCGCTAT
CCGCTGGAGG GCTATCGCGA GAAATGCGGC ACCGACGTCA CGCTCGGCAC GCGCTTCGCG
AGGAAGCCGA TCAAGCTGAA GATCCCGGTG ACCGTCGCCG GCATGAGCTT CGGCTCATTG
TCCGGTCCGG CCAAGGAGGC ATTGGGGCGC GGCGCCTCCG CAGCCGGCAC CTCGACCACC
ACGGGCGACG GCGGCATGAC GCCGGAGGAG CGCGGCCACT CGTCGATCCT GGTCTATCAA
TATCTGCCGT CGCGCTACGG CATGAATCCC GATGATCTGC GCAAAGCGGA TGCGATCGAG
ATCGTGATCG GGCAGGGCGC CAAGCCCGGC GGCGGCGGCA TGCTGCTCGG GCAGAAGATC
TCGCCACGCG TCGCCAAGAT GCGCACATTG CCCGAGGGCA TCGACCAGCG CTCGGCCTGC
CGCCACCCGG ACTGGACCGG ACCCGACGAT CTCGAGATCA AGATCGAGGA GCTGCGCGAG
ATCACCGATT GGGAGAAGCC GATCTACGTC AAGGTCGGCG CCAGCCGTCC CTATTACGAC
ACGGCGCTGG CGGCGAAGTC CGGTGCCGAT GTCATCGTGC TCGACGGCAT GCAGGGCGGC
ACCGCCGCGA CCCAGGACGT CTTCATCGAA CATGTCGGGC TGCCCACGCT CGCCGCGATC
CGGCCCGCCG TGCAGGCGCT GCAGGATCTC GGTCTGCATC GCAAGCTGCA GCTGATCGTC
TCCGGTGGCA TCCGCACCGG CGCCGATGTC GCCAAGGCGC TCGCGCTCGG CGCCGACGCG
GTCTCGATCG GCACCGCGGC GCTGATCGCG CTCGGCGACA ATGATCCGCA ATGGGAGGCC
GAGTATCAGA AGCTCGGCAC CACCGCCGGC GCCTATGATG ATTGGCAGGA AGGTCTCGAT
CCCGCGGGGA TCACGACCCA GGATCCCGTG CTGGCCGCGC GGCTCGATCC GGTCAAGGCC
GGCCGCCGGC TCGCTAACTA TCTCTCGGTG CTGACGTTGG AGGCGCAGAC GATCGCGCGG
GCCTGCGGCA AGAGTCATCT GCATAATCTT GAGCCGGAGG ATCTCGTCGC CTTGACGATC
GAGGCGGCGG CGATGGCCGG CGTGCCGCTC GCCGGCACCA ACTGGATTCC GGGACGCGAC
AAATAG
 
Protein sequence
MSVPPHRTPP RFSATFNPNV IAEIQRAAAT GIYDIRGGGA KRALPHFDDL LFLGASISRY 
PLEGYREKCG TDVTLGTRFA RKPIKLKIPV TVAGMSFGSL SGPAKEALGR GASAAGTSTT
TGDGGMTPEE RGHSSILVYQ YLPSRYGMNP DDLRKADAIE IVIGQGAKPG GGGMLLGQKI
SPRVAKMRTL PEGIDQRSAC RHPDWTGPDD LEIKIEELRE ITDWEKPIYV KVGASRPYYD
TALAAKSGAD VIVLDGMQGG TAATQDVFIE HVGLPTLAAI RPAVQALQDL GLHRKLQLIV
SGGIRTGADV AKALALGADA VSIGTAALIA LGDNDPQWEA EYQKLGTTAG AYDDWQEGLD
PAGITTQDPV LAARLDPVKA GRRLANYLSV LTLEAQTIAR ACGKSHLHNL EPEDLVALTI
EAAAMAGVPL AGTNWIPGRD K